RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 A1L4Q6 167 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 H3BRM9 83 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 SMAD7O15105 426 aaKnown RBP10.13□□□□□ -0.79
DDX11-223ENST00000542838 NBR2O15453 112 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 SMIM15Q7Z3B0 74 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 IGFBPL1Q8WX77 278 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 HILPDAQ9Y5L2 63 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 TPRP12270 2363 aaKnown RBP10.13□□□□□ -0.79
DDX11-223ENST00000542838 C9orf118A6NHY6 69 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 NPYP01303 97 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 TWIST1Q15672 202 aa10.13□□□□□ -0.79
DDX11-223ENST00000542838 B9A039 149 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 H3BUT2 72 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 GTF2H5Q6ZYL4 71 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 NAA38Q9BRA0 125 aaKnown RBP10.12□□□□□ -0.79
DDX11-223ENST00000542838 POLEQ07864 2286 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 EGR2P11161 476 aaPredicted RBP10.12□□□□□ -0.79
DDX11-223ENST00000542838 MFAP4P55083 255 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 HSD52Q0P140 79 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 KIR3DS1Q14943 382 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 OR9G4Q8NGQ1 327 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 PRR25Q96S07 402 aa10.12□□□□□ -0.79
DDX11-223ENST00000542838 NMUP48645 174 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 PAX8Q06710 450 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 JMJD8Q96S16 334 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 SELENOKQ9Y6D0 94 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 DMXL2Q8TDJ6 3036 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 ZZEF1O43149 2961 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 Q8TAT8 98 aa10.11□□□□□ -0.79
DDX11-223ENST00000542838 NPIPB5A8MRT5 1133 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 HES1Q14469 280 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 RAB37Q96AX2 223 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 SIVA1O15304 175 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 NDUFS7O75251 213 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 CD3EP07766 207 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 PRSS57Q6UWY2 283 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 ADAMTSL5Q6ZMM2 481 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 OR4X2Q8NGF9 303 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 DPM3Q9P2X0 92 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 KALRNO60229 2985 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 SAP30O75446 220 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 ZNF80P51504 273 aaPredicted RBP10.1□□□□□ -0.79
DDX11-223ENST00000542838 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
DDX11-223ENST00000542838 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 DKK2Q9UBU2 259 aa10.1□□□□□ -0.79
DDX11-223ENST00000542838 IGLV11-55A0A075B6I3 123 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 A0A0G2JLM5 398 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
DDX11-223ENST00000542838 BMI1P35226 326 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 IGFL4Q6B9Z1 124 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 ABHD17AQ96GS6 310 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 C18orf15Q96N68 181 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 VGLL1Q99990 258 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 APC2O95996 2303 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 ARHGAP32A7KAX9 2087 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.09□□□□□ -0.79
DDX11-223ENST00000542838 NDUFA3O95167 84 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 COX8CQ7Z4L0 72 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 NPBQ8NG41 125 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 CFHR4Q92496 578 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 ZNF318Q5VUA4 2279 aa10.09□□□□□ -0.79
DDX11-223ENST00000542838 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
DDX11-223ENST00000542838 C5orf64Q2M2E5 130 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 C21orf62Q9NYP8 219 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 ADGRG4Q8IZF6 3080 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 K7EP34 96 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 ORM1P02763 201 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 IGLC6P0CF74 106 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 HLA-DMBP28068 263 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 KLRD1Q13241 179 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 OR2K2Q8NGT1 345 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
DDX11-223ENST00000542838 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
DDX11-223ENST00000542838 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
DDX11-223ENST00000542838 CEACAM3P40198 252 aa10.07□□□□□ -0.8
DDX11-223ENST00000542838 ZNF672Q499Z4 452 aaPredicted RBP10.07□□□□□ -0.8
DDX11-223ENST00000542838 ARPC1AQ92747 370 aa10.07□□□□□ -0.8
DDX11-223ENST00000542838 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
DDX11-223ENST00000542838 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
DDX11-223ENST00000542838 ACACAQ13085 2346 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 FBLL1A6NHQ2 334 aaKnown RBP10.06□□□□□ -0.8
DDX11-223ENST00000542838 TM4SF20Q53R12 229 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 Q8NA96 180 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 LY6G5BQ8NDX9 201 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 DMXL1Q9Y485 3027 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 NCBP2LA6PVI3 153 aaKnown RBP10.06□□□□□ -0.8
DDX11-223ENST00000542838 GAS8-AS1O95177 125 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 LEPP41159 167 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 NDPQ00604 133 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 OR11H6Q8NGC7 330 aa10.06□□□□□ -0.8
DDX11-223ENST00000542838 IGHV3OR16-8A0A075B7F1 116 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 ZNF575Q86XF7 245 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms