RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 NHLH2Q02577 135 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 LRRC37A5PQ49AS3 106 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 OR5C1Q8NGR4 320 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 LINC01587Q99440 93 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 DNAH6Q9C0G6 4158 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 H3BTX0 84 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 TAS2R60P59551 318 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 C20orf144Q9BQM9 153 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 KCNIP2Q9NS61 270 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 OR5AC2Q9NZP5 309 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 TMEM14CQ9P0S9 112 aa12.42□□□□□ -0.42
LTBR-210ENST00000542830 PET100P0DJ07 73 aa12.41□□□□□ -0.42
LTBR-210ENST00000542830 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
LTBR-210ENST00000542830 ZNF586Q9NXT0 402 aa12.41□□□□□ -0.42
LTBR-210ENST00000542830 PLA2G2EQ9NZK7 142 aa12.41□□□□□ -0.42
LTBR-210ENST00000542830 TRBV19A0A075B6N1 114 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 H0YIZ8 118 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 SSNA1O43805 119 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 HIST1H1EP10412 219 aaKnown RBP12.4□□□□□ -0.42
LTBR-210ENST00000542830 HTN3P15516 51 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 H2BFSP57053 126 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 PDE6HQ13956 83 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 THAP6Q8TBB0 222 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 PPP1R1CQ8WVI7 109 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 C16orf74Q96GX8 76 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 ODF3Q96PU9 254 aa12.4□□□□□ -0.42
LTBR-210ENST00000542830 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 H7BYZ3 331 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 PRM2P04554 102 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 PRB4P10163 310 aaPredicted RBP12.39□□□□□ -0.43
LTBR-210ENST00000542830 CLINT1Q14677 625 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 ZNF493Q6ZR52 646 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 WDR61Q9GZS3 305 aaKnown RBP12.39□□□□□ -0.43
LTBR-210ENST00000542830 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
LTBR-210ENST00000542830 AZU1P20160 251 aa12.38□□□□□ -0.43
LTBR-210ENST00000542830 LEPP41159 167 aa12.38□□□□□ -0.43
LTBR-210ENST00000542830 TIMM9Q9Y5J7 89 aa12.38□□□□□ -0.43
LTBR-210ENST00000542830 DNAH10Q8IVF4 4471 aa12.38□□□□□ -0.43
LTBR-210ENST00000542830 PLAC8L1A1L4L8 177 aa12.37□□□□□ -0.43
LTBR-210ENST00000542830 NPIPB6E9PJ23 425 aa12.37□□□□□ -0.43
LTBR-210ENST00000542830 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
LTBR-210ENST00000542830 HTN1P15515 57 aa12.37□□□□□ -0.43
LTBR-210ENST00000542830 GCSAMLQ5JQS6 135 aa12.37□□□□□ -0.43
LTBR-210ENST00000542830 TMEM263Q8WUH6 116 aaKnown RBP12.37□□□□□ -0.43
LTBR-210ENST00000542830 ATP5SQ99766 215 aa12.37□□□□□ -0.43
LTBR-210ENST00000542830 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
LTBR-210ENST00000542830 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
LTBR-210ENST00000542830 MPC2O95563 127 aa12.36□□□□□ -0.43
LTBR-210ENST00000542830 PYYP10082 97 aa12.36□□□□□ -0.43
LTBR-210ENST00000542830 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
LTBR-210ENST00000542830 AAMDCQ9H7C9 122 aa12.36□□□□□ -0.43
LTBR-210ENST00000542830 NDUFB4O95168 129 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 CT45A10P0DMU9 189 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 CCDC28AQ8IWP9 274 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
LTBR-210ENST00000542830 BLNKQ8WV28 456 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 SLC25A2Q9BXI2 301 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 PARD6GQ9BYG4 376 aaPredicted RBP12.35□□□□□ -0.43
LTBR-210ENST00000542830 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 FRAS1Q86XX4 4008 aa12.35□□□□□ -0.43
LTBR-210ENST00000542830 M0R3E3 92 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 UBE2DNLQ8IWF7 75 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 FAM167A-AS1Q96KT0 104 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 LINC00477Q96M19 166 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 OR51M1Q9H341 326 aa12.34□□□□□ -0.43
LTBR-210ENST00000542830 CBY3A6NI87 242 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 IFNA5P01569 189 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 ATP5G1P05496 136 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 RPL12P30050 165 aaKnown RBP12.33□□□□□ -0.44
LTBR-210ENST00000542830 ATP5G3P48201 142 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 FCN2Q15485 313 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 SCGB1C1Q8TD33 95 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 PAXXQ9BUH6 204 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 MBD2Q9UBB5 411 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
LTBR-210ENST00000542830 J3KRW8 73 aa12.32□□□□□ -0.44
LTBR-210ENST00000542830 SLC25A5P05141 298 aaKnown RBP12.32□□□□□ -0.44
LTBR-210ENST00000542830 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
LTBR-210ENST00000542830 RNF212Q495C1 297 aa12.32□□□□□ -0.44
LTBR-210ENST00000542830 EXOC3-AS1Q8N2X6 119 aa12.32□□□□□ -0.44
LTBR-210ENST00000542830 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
LTBR-210ENST00000542830 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
LTBR-210ENST00000542830 F5H768 121 aa12.31□□□□□ -0.44
LTBR-210ENST00000542830 ICAM4Q14773 271 aa12.31□□□□□ -0.44
LTBR-210ENST00000542830 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
LTBR-210ENST00000542830 TRAV12-3A0A0B4J271 114 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 C7orf71A4D174 169 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 PTTG1O95997 202 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 ERCC8Q13216 396 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 FFAR4Q5NUL3 377 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 C9orf47Q6ZRZ4 202 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 FXYD5Q96DB9 178 aa12.3□□□□□ -0.44
LTBR-210ENST00000542830 SMIM3Q9BZL3 60 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms