RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 RNF223E7ERA6 249 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 CHEK1O14757 476 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
LDB3-207ENST00000542786 TRBV12-3P01733 135 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 HLA-DMBP28068 263 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 SLAQ13239 276 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 KLK15Q9H2R5 256 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 VPS13CQ709C8 3753 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 IGHV4-59P01825 116 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
LDB3-207ENST00000542786 TPPP2P59282 170 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 JOSD1Q15040 202 aaPredicted RBP10.89□□□□□ -0.67
LDB3-207ENST00000542786 C8orf49Q96NF6 230 aa10.89□□□□□ -0.67
LDB3-207ENST00000542786 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.88□□□□□ -0.67
LDB3-207ENST00000542786 SERF1AO75920 110 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 CSN1S1P47710 185 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 KIAA1644Q3SXP7 199 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 IGFL4Q6B9Z1 124 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 USMG5Q96IX5 58 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 PSMG3-AS1Q96PY0 264 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 METTL26Q96S19 204 aa10.88□□□□□ -0.67
LDB3-207ENST00000542786 CELSR1Q9NYQ6 3014 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 CSPG4Q6UVK1 2322 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 TRAV8-2A0A0B4J237 113 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 FBLL1A6NHQ2 334 aaKnown RBP10.87□□□□□ -0.67
LDB3-207ENST00000542786 TGFAP01135 160 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 APCSP02743 223 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 RBPMS2Q6ZRY4 209 aaKnown RBP10.87□□□□□ -0.67
LDB3-207ENST00000542786 DAZAP1Q96EP5 407 aaKnown RBP10.87□□□□□ -0.67
LDB3-207ENST00000542786 VGLL1Q99990 258 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 IGHV3-66A0A0C4DH42 116 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 ZNF705FA8MVS1 300 aaPredicted RBP10.87□□□□□ -0.67
LDB3-207ENST00000542786 GZMBP10144 247 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 ARL3P36405 182 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 RAB4BP61018 213 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 Q5PR19 223 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 OR2D3Q8NGH3 330 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 PRDM13Q9H4Q3 707 aa10.87□□□□□ -0.67
LDB3-207ENST00000542786 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 ZNF207O43670 478 aaKnown RBP10.86□□□□□ -0.67
LDB3-207ENST00000542786 OR10J3Q5JRS4 329 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 LCN12Q6JVE5 192 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 UNQ9165/PRO28630Q6UXU0 137 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 OR5R1Q8NH85 324 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 PGLYRP4Q96LB8 373 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 PRR25Q96S07 402 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
LDB3-207ENST00000542786 PRRC2AP48634 2157 aaKnown RBP10.86□□□□□ -0.67
LDB3-207ENST00000542786 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 SRIP30626 198 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 HBBP68871 147 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 SLC50A1Q9BRV3 221 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 CENPEQ02224 2701 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 ABCA12Q86UK0 2595 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 A8MWP6 167 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 NDUFA4O00483 81 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 TMEM95Q3KNT9 176 aa10.85□□□□□ -0.67
LDB3-207ENST00000542786 MAP1AP78559 2803 aaPredicted RBP10.84□□□□□ -0.67
LDB3-207ENST00000542786 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 HAX1O00165 279 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 SH2D1AO60880 128 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 PF4V1P10720 104 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
LDB3-207ENST00000542786 SAPCD1Q5SSQ6 148 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 LCNL1Q6ZST4 164 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 ZNF575Q86XF7 245 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 GATD1Q8NB37 220 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 Q8TAT8 98 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
LDB3-207ENST00000542786 RCHY1Q96PM5 261 aa10.84□□□□□ -0.67
LDB3-207ENST00000542786 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
LDB3-207ENST00000542786 SMAD7O15105 426 aaKnown RBP10.83□□□□□ -0.68
LDB3-207ENST00000542786 CAMPP49913 170 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 C8orf86Q6ZUL3 223 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 BAGE3Q86Y29 109 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 ALKBH7Q9BT30 221 aaPredicted RBP10.83□□□□□ -0.68
LDB3-207ENST00000542786 IGHV3-11P01762 117 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 PSMB8P28062 276 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 ZNF80P51504 273 aaPredicted RBP10.83□□□□□ -0.68
LDB3-207ENST00000542786 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 Q6YL49 198 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 Q6ZWC4 215 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 GPHB5Q86YW7 130 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 OR4X2Q8NGF9 303 aa10.83□□□□□ -0.68
LDB3-207ENST00000542786 ZANQ9Y493 2812 aa10.82□□□□□ -0.68
LDB3-207ENST00000542786 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
LDB3-207ENST00000542786 PAFAH1B2P68402 229 aa10.82□□□□□ -0.68
LDB3-207ENST00000542786 FAM162BQ5T6X4 162 aa10.82□□□□□ -0.68
LDB3-207ENST00000542786 Q96MF0 132 aa10.82□□□□□ -0.68
LDB3-207ENST00000542786 A0A0G2JLM5 398 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 CT45A10P0DMU9 189 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 ERCC8Q13216 396 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 VPREB3Q9UKI3 123 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms