RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 COX6A2Q02221 97 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 Q0VG73 95 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 MLLT11Q13015 90 aaPredicted RBP1.95□□□□□ -2.1
CHD4-209ENST00000542717 ELOBQ15370 118 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 ASB16-AS1Q495Z4 193 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 OR8G2PQ6IF36 304 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 DHRS11Q6UWP2 260 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 TMEM17Q86X19 198 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 C8orf59Q8N0T1 100 aaPredicted RBP1.95□□□□□ -2.1
CHD4-209ENST00000542717 DHRSXQ8N5I4 330 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 EIF4E3Q8N5X7 224 aaKnown RBP1.95□□□□□ -2.1
CHD4-209ENST00000542717 C11orf72Q8NBR9 251 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 SLC24A4Q8NFF2 622 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 BEST4Q8NFU0 473 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 OR5AP2Q8NGF4 316 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 OR52I2Q8NH67 350 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 ACY3Q96HD9 319 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 PRADC1Q9BSG0 188 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 PDCD10Q9BUL8 212 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 NAA50Q9GZZ1 169 aaKnown RBP1.95□□□□□ -2.1
CHD4-209ENST00000542717 GTSF1LQ9H1H1 148 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 S100A14Q9HCY8 104 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 ENY2Q9NPA8 101 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 ACOT13Q9NPJ3 140 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 Q9UF83 564 aa1.95□□□□□ -2.1
CHD4-209ENST00000542717 IGHV1OR15-1A0A075B7D0 117 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 A0A087WX48 190 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 PTGES3LE9PB15 166 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 GPR31O00270 319 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 RGS13O14921 159 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 GNAO1P09471 354 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 SLC25A4P12235 298 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 MYL9P24844 172 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 S100GP29377 79 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 LEPP41159 167 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 ZNF138P52744 262 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 POLR2GP62487 172 aaKnown RBP eCLIP1.94□□□□□ -2.1
CHD4-209ENST00000542717 BSXQ3C1V8 233 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 PHLDA2Q53GA4 152 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 C1orf137Q5JT78 98 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 PRSS54Q6PEW0 395 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 IQCF2Q8IXL9 164 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 BPIFCQ8NFQ6 507 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 OR4C5Q8NGB2 326 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 OR10P1Q8NGE3 313 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 RNASEH2CQ8TDP1 164 aaKnown RBP1.94□□□□□ -2.1
CHD4-209ENST00000542717 NPIPB3Q92617 1050 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 MRGPRFQ96AM1 343 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 RPUSD4Q96CM3 377 aaKnown RBP1.94□□□□□ -2.1
CHD4-209ENST00000542717 ZNF2Q9BSG1 426 aaPredicted RBP1.94□□□□□ -2.1
CHD4-209ENST00000542717 TMEM222Q9H0R3 208 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 SLC25A32Q9H2D1 315 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 C8orf4Q9NR00 106 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 EHFQ9NZC4 300 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 SSR3Q9UNL2 185 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 TMEM56-RWDD3S4R434 201 aa1.94□□□□□ -2.1
CHD4-209ENST00000542717 TRAV18A0A075B6X5 111 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 A0A0A6YYH2 397 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 TRAV8-2A0A0B4J237 113 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 TRDV1A0A1B0GX56 115 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 SMIM30A4D0T7 59 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 A6NJ64 397 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 ZFP92A6NM28 416 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 NOTOA8MTQ0 251 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 SNRPGP15A8MWD9 76 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 MPDU1O75352 247 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 NDUFS6O75380 124 aaKnown RBP1.93□□□□□ -2.1
CHD4-209ENST00000542717 IGKV1-5P01602 117 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 HLA-DMAP28067 261 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 HTR2BP41595 481 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 TAS2R20P59543 309 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 RAB31Q13636 194 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 IZUMO4Q1ZYL8 232 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 ANXA2RQ3ZCQ2 193 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 ETFRF1Q6IPR1 90 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 TBC1D26Q86UD7 250 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 NIT1Q86X76 327 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 ARRDC1Q8N5I2 433 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 PACRGLQ8N7B6 248 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 CLRN3Q8NCR9 226 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 OR4D10Q8NGI6 311 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 OR10G4Q8NGN3 311 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 OR10G9Q8NGN4 311 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 ZNF431Q8TF32 576 aaPredicted RBP1.93□□□□□ -2.1
CHD4-209ENST00000542717 RRNAD1Q96FB5 475 aaKnown RBP1.93□□□□□ -2.1
CHD4-209ENST00000542717 MGLLQ99685 303 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 FXYD6Q9H0Q3 95 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 PPDPFQ9H3Y8 114 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 IFT46Q9NQC8 304 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 RHBDL2Q9NX52 303 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 SCN3BQ9NY72 215 aa1.93□□□□□ -2.1
CHD4-209ENST00000542717 RRP15Q9Y3B9 282 aaKnown RBP1.93□□□□□ -2.1
CHD4-209ENST00000542717 TRAV4A0A0B4J268 109 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 C7orf71A4D174 169 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 MEIS3P1A6NDR6 274 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 TMEM262E9PQX1 116 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 H0Y9J4 135 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms