RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 AZU1P20160 251 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 ATP5G3P48201 142 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 S100A10P60903 97 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 IL15RAQ13261 267 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 MIC13Q5XKP0 118 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 MZT2BQ6NZ67 158 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
VPS33A-206ENST00000542310 SAT2Q96F10 170 aaPredicted RBP11.01□□□□□ -0.65
VPS33A-206ENST00000542310 TIMM8BQ9Y5J9 83 aaPredicted RBP11.01□□□□□ -0.65
VPS33A-206ENST00000542310 CBY3A6NI87 242 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 MPDU1O75352 247 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 DEFB130BP0DP73 79 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 DEFB130AP0DP74 79 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 BAXQ07812 192 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 ATP6V1FQ16864 119 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 SOHLH1Q5JUK2 328 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 TMEM252Q8N6L7 170 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 S100ZQ8WXG8 99 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 SLC39A9Q9NUM3 307 aa11□□□□□ -0.65
VPS33A-206ENST00000542310 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 IGSF23A1L1A6 192 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 H3BQ15 152 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 ASAH1Q13510 395 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 RAB32Q13637 225 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 GFI1BQ5VTD9 330 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 TMEM14CQ9P0S9 112 aa10.99□□□□□ -0.65
VPS33A-206ENST00000542310 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 F5H768 121 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 LEPP41159 167 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 PDE6HQ13956 83 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 LINC00612Q8N6U2 182 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 ATG101Q9BSB4 218 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 KIAA1109Q2LD37 5005 aa10.98□□□□□ -0.65
VPS33A-206ENST00000542310 PRAC2D3DTV9 90 aa10.97□□□□□ -0.65
VPS33A-206ENST00000542310 H3BTX0 84 aa10.97□□□□□ -0.65
VPS33A-206ENST00000542310 SNRPCP09234 159 aaKnown RBP10.97□□□□□ -0.65
VPS33A-206ENST00000542310 FGF7P21781 194 aa10.97□□□□□ -0.65
VPS33A-206ENST00000542310 CCDC28AQ8IWP9 274 aa10.97□□□□□ -0.65
VPS33A-206ENST00000542310 ZNF586Q9NXT0 402 aa10.97□□□□□ -0.65
VPS33A-206ENST00000542310 PRELID1Q9Y255 219 aa10.97□□□□□ -0.65
VPS33A-206ENST00000542310 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
VPS33A-206ENST00000542310 TRAV5A0A0B4J249 113 aa10.96□□□□□ -0.65
VPS33A-206ENST00000542310 HTN1P15515 57 aa10.96□□□□□ -0.65
VPS33A-206ENST00000542310 FCN2Q15485 313 aa10.96□□□□□ -0.65
VPS33A-206ENST00000542310 PYGO2Q9BRQ0 406 aa10.96□□□□□ -0.65
VPS33A-206ENST00000542310 NPCDR1Q9BY65 106 aa10.96□□□□□ -0.65
VPS33A-206ENST00000542310 GPN1Q9HCN4 374 aaPredicted RBP10.96□□□□□ -0.65
VPS33A-206ENST00000542310 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
VPS33A-206ENST00000542310 PKD1P98161 4303 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
VPS33A-206ENST00000542310 HIST1H1EP10412 219 aaKnown RBP10.95□□□□□ -0.66
VPS33A-206ENST00000542310 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 C1orf134Q5TEV5 83 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 ENKURQ8TC29 256 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 PARD6GQ9BYG4 376 aaPredicted RBP10.95□□□□□ -0.66
VPS33A-206ENST00000542310 KCNIP2Q9NS61 270 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 DNAH11Q96DT5 4516 aa10.95□□□□□ -0.66
VPS33A-206ENST00000542310 SNURFLB1AK76 121 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 NUDT3O95989 172 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 MED14OSP0DP75 135 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 CCL18P55774 89 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 ZNRF2Q8NHG8 242 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 RNF141Q8WVD5 230 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 ZNF503Q96F45 646 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 NMES1Q9C002 83 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 SLC25A31Q9H0C2 315 aa10.94□□□□□ -0.66
VPS33A-206ENST00000542310 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
VPS33A-206ENST00000542310 E5RGE8 158 aa10.93□□□□□ -0.66
VPS33A-206ENST00000542310 PRAF2O60831 178 aa10.93□□□□□ -0.66
VPS33A-206ENST00000542310 UPK1BO75841 260 aa10.93□□□□□ -0.66
VPS33A-206ENST00000542310 RLN2P04090 185 aa10.93□□□□□ -0.66
VPS33A-206ENST00000542310 SLC25A5P05141 298 aaKnown RBP10.93□□□□□ -0.66
VPS33A-206ENST00000542310 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
VPS33A-206ENST00000542310 LINC00467Q9BRT7 94 aa10.93□□□□□ -0.66
VPS33A-206ENST00000542310 NBDYA0A0U1RRE5 68 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 C7orf71A4D174 169 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 KLLNB2CW77 178 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 H3BNG1 76 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 M0R3E3 92 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 NDUFB4O95168 129 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 M6PRP20645 277 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 DAZ2Q13117 558 aaKnown RBP10.92□□□□□ -0.66
VPS33A-206ENST00000542310 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 MRPL32Q9BYC8 188 aaKnown RBP10.92□□□□□ -0.66
VPS33A-206ENST00000542310 AAMDCQ9H7C9 122 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 TIMM9Q9Y5J7 89 aa10.92□□□□□ -0.66
VPS33A-206ENST00000542310 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 NMBP08949 121 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 PYYP10082 97 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 CYCSP99999 105 aaKnown RBP10.91□□□□□ -0.66
VPS33A-206ENST00000542310 CLINT1Q14677 625 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 SLC25A2Q9BXI2 301 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 LINC00588Q9Y4M8 146 aa10.91□□□□□ -0.66
VPS33A-206ENST00000542310 J3KRW8 73 aa10.9□□□□□ -0.66
VPS33A-206ENST00000542310 CRISP2P16562 243 aa10.9□□□□□ -0.66
VPS33A-206ENST00000542310 NHLH2Q02577 135 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms