RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 LRRC20Q8TCA0 184 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 RNF141Q8WVD5 230 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 ZNF503Q96F45 646 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 LINC00052Q96N35 136 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 CLUHP3Q96NS8 147 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 PAXXQ9BUH6 204 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 ZNF586Q9NXT0 402 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
CLSTN3-212ENST00000541770 KMT2AQ03164 3969 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 H3BMM0 161 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 SLC17A3O00476 420 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 OR7C2O60412 319 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 NBEAP1P0C6P0 100 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 STAG3L2P0CL84 134 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 STAG3L3P0CL85 134 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 TPT1P13693 172 aaKnown RBP6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 HLA-DRB4P13762 266 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 PSG9Q00887 426 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 PSG3Q16557 428 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 FAM122CQ6P4D5 195 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 TRPT1Q86TN4 253 aaKnown RBP6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 SLC51BQ86UW2 128 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 C11orf45Q8TAV5 145 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 C2CD4CQ8TF44 421 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 FXYD5Q96DB9 178 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 MRPL53Q96EL3 112 aaKnown RBP6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 C20orf173Q96LM9 149 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 ACTR3CQ9C0K3 210 aaPredicted RBP6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 SAV1Q9H4B6 383 aaPredicted RBP6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 HLA-DRB4X5D2U9 266 aa6.34□□□□□ -1.39
CLSTN3-212ENST00000541770 DNAH10Q8IVF4 4471 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 A0A0J9YX75 114 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 KNCNA6PVL3 124 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 A8MTW9 85 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 IGLL5B9A064 214 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 UMAD1C9J7I0 102 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 NDUFB4O95168 129 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 SNRPCP09234 159 aaKnown RBP6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 UBE2L3P68036 154 aaKnown RBP6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 ACTL10Q5JWF8 245 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 IGFL4Q6B9Z1 124 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 EBLN2Q6P2I7 272 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 MORN3Q6PF18 240 aaPredicted RBP6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 LYPD1Q8N2G4 141 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 RARRES2Q99969 163 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 CSTL1Q9H114 145 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 PRELID1Q9Y255 219 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 RYR1P21817 5038 aa6.33□□□□□ -1.4
CLSTN3-212ENST00000541770 CTXND1A0A1B0GTU2 59 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 H3BTX0 84 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 DEFB4AO15263 64 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 DUSP14O95147 198 aaKnown RBP6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 CXorf1O96002 111 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 OR10J4P0C629 311 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 ARL14EPLP0DKL9 152 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 HLA-DMBP28068 263 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 NUTF2P61970 127 aaKnown RBP6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 ZNF726P1Q15940 193 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 EIF5AL1Q6IS14 154 aaKnown RBP6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 DPPA3Q6W0C5 159 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 ZNF738Q8NE65 137 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 BLNKQ8WV28 456 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 AAMDCQ9H7C9 122 aa6.32□□□□□ -1.4
CLSTN3-212ENST00000541770 PRSS29PA6NIE9 313 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 F6UB75 175 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 HMGB3O15347 200 aaKnown RBP6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 EIF3GO75821 320 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 GCHFRP30047 84 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 RAB5CP51148 216 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 DEFB1P60022 68 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 SSX7Q7RTT5 188 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 OR8A1Q8NGG7 326 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 OR11H2Q8NH07 326 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 TMED6Q8WW62 240 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 RPUSD4Q96CM3 377 aaKnown RBP6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 PHYHIPLQ96FC7 376 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 TMEM167BQ9NRX6 74 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 PLA2G2EQ9NZK7 142 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 MUC4Q99102 2169 aa6.31□□□□□ -1.4
CLSTN3-212ENST00000541770 ZNF705FA8MVS1 300 aaPredicted RBP6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 CA1P00915 261 aaPredicted RBP6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 IFNA7P01567 189 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 GIG44P09565 113 aaPredicted RBP6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 CNN1P51911 297 aaKnown RBP6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 TCTAP57738 103 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 RANP62826 216 aaKnown RBP6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 IFITM2Q01629 132 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 ICAM4Q14773 271 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 ALKAL2Q6UX46 152 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 ZNF767PQ75MW2 155 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 EXOC3-AS1Q8N2X6 119 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 ARL6IP6Q8N6S5 226 aa6.3□□□□□ -1.4
CLSTN3-212ENST00000541770 OR4B1Q8NGF8 309 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms