RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CFHR4Q92496 578 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 TNRC6AQ8NDV7 1962 aaKnown RBP12.5□□□□□ -0.41
HMGA2-210ENST00000541363 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
HMGA2-210ENST00000541363 H0YJW9 148 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 GAGE7O76087 117 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 ANGP03950 147 aaKnown RBP12.5□□□□□ -0.41
HMGA2-210ENST00000541363 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 NDUFA12Q9UI09 145 aa12.5□□□□□ -0.41
HMGA2-210ENST00000541363 IGFL4Q6B9Z1 124 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
HMGA2-210ENST00000541363 K7EP34 96 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 Q86TA4 180 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
HMGA2-210ENST00000541363 PRSS46E5RG02 174 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 ZNF664Q8N3J9 261 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 ZNF883P0CG24 379 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 TMEM178BH3BS89 294 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 K7EP13 123 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
HMGA2-210ENST00000541363 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 KNCNA6PVL3 124 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 SPATA25Q9BR10 227 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 A0A1W2PPM0 123 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 H3BQ85 93 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 ABCA7Q8IZY2 2146 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 A0A1B0GX51 115 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 LINC01619G3V211 115 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 C4orf48Q5BLP8 95 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 BOD1L2Q8IYS8 172 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 ACYP1P07311 99 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 FNDC10F2Z333 226 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 PROP1O75360 226 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 BRD3OSQ6XYD6 125 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 KLHDC3Q9BQ90 382 aa12.48□□□□□ -0.41
HMGA2-210ENST00000541363 RALGAPA2Q2PPJ7 1873 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 RS1O15537 224 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 SPINK13Q1W4C9 94 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 GATA4P43694 442 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 SIGLEC9Q9Y336 463 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 CFHR2P36980 270 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 H0YIZ8 118 aa12.47□□□□□ -0.41
HMGA2-210ENST00000541363 BAALC-AS2P0C853 105 aa12.46□□□□□ -0.41
HMGA2-210ENST00000541363 RPL18AQ02543 176 aaKnown RBP12.46□□□□□ -0.41
HMGA2-210ENST00000541363 CFPP27918 469 aa12.46□□□□□ -0.41
HMGA2-210ENST00000541363 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.41
HMGA2-210ENST00000541363 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
HMGA2-210ENST00000541363 C8orf49Q96NF6 230 aa12.46□□□□□ -0.41
HMGA2-210ENST00000541363 ETDCA0A1B0GVM5 59 aa12.46□□□□□ -0.41
HMGA2-210ENST00000541363 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
HMGA2-210ENST00000541363 KLK9Q9UKQ9 250 aa12.46□□□□□ -0.41
HMGA2-210ENST00000541363 ADAMTSL3P82987 1691 aa12.46□□□□□ -0.42
HMGA2-210ENST00000541363 MED12LQ86YW9 2145 aa12.46□□□□□ -0.42
HMGA2-210ENST00000541363 SS18L2Q9UHA2 77 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 TSC2P49815 1807 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 SHISA3A0PJX4 238 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
HMGA2-210ENST00000541363 IGHV4-28A0A0C4DH34 117 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 BTCP35070 178 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 IGKV2D-24A0A075B6R9 120 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 NTF4P34130 210 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 Q0VG73 95 aa12.45□□□□□ -0.42
HMGA2-210ENST00000541363 IGHV3-38A0A0C4DH36 116 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 ZNF503Q96F45 646 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 SHANK2-AS3Q9BTD1 123 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 EML6Q6ZMW3 1958 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 IGHV1OR15-1A0A075B7D0 117 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 PAX9P55771 341 aa12.44□□□□□ -0.42
HMGA2-210ENST00000541363 TRAV12-2A0A075B6T6 113 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 TRAV3A0A0B4J244 114 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 COX8AP10176 69 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 SRRM5B3KS81 715 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 BUB3O43684 328 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 NDUFB8O95169 186 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 RPP25LQ8N5L8 163 aaKnown RBP12.43□□□□□ -0.42
HMGA2-210ENST00000541363 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
HMGA2-210ENST00000541363 ZNF407Q9C0G0 2248 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 PYY3Q5JQD4 70 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 SDHAF1A6NFY7 115 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 PSMB8P28062 276 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 LY6DQ14210 128 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 GLI3P10071 1580 aa12.43□□□□□ -0.42
HMGA2-210ENST00000541363 TMEM213A2RRL7 107 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 K7ERS5 55 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 IGLC2P0DOY2 106 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
HMGA2-210ENST00000541363 TMEM14EPQ6UXP3 125 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms