RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 BPIFA4PQ86YQ2 179 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 OR1L4Q8NGR5 311 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 DAZAP1Q96EP5 407 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 TMEM191AQ9H0A3 160 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 TCRBV4S1A1TA0A5B7 111 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 CD5LO43866 347 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 RBP4P02753 201 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 FAM106AQ4KMX7 169 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 ZNF833PQ6ZTB9 187 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
SFSWAP-210ENST00000541286 PLP1P60201 277 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 CACNG8Q8WXS5 425 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 MRPL32Q9BYC8 188 aaKnown RBP11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 CHODLQ9H9P2 273 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 CYSRT1A8MQ03 144 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 NBEAP1P0C6P0 100 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 OR5AN1Q8NGI8 311 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 MBD6Q96DN6 1003 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 CGB1A6NKQ9 187 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
SFSWAP-210ENST00000541286 G3V4G9 280 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 OVOL3O00110 214 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 TTTY13Q9BZ97 58 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 F8P00451 2351 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 C22orf46C9J442 243 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 HLA-DRB1P01911 266 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 LGALS7P47929 136 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
SFSWAP-210ENST00000541286 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 IGHV4-61A0A0C4DH41 118 aa11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 AZU1P20160 251 aa11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 ZFP36P26651 326 aaKnown RBP11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 C2orf91Q6ZV80 131 aa11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 PRNTQ86SH4 94 aa11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.59
SFSWAP-210ENST00000541286 CHEK1O14757 476 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 P01737 135 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 RPL27AP46776 148 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 NMUP48645 174 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 TMEM167AQ8TBQ9 72 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 A0A0G2JLM5 398 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 CNIH1O95406 144 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 KIR3DS1Q14943 382 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 GTSF1Q8WW33 167 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 GRAMD2BQ96HH9 432 aa11.33□□□□□ -0.6
SFSWAP-210ENST00000541286 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 IGHV3OR16-10A0A075B7F0 116 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 EFNA4P52798 201 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 HIST1H1AQ02539 215 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 CIARTQ8N365 385 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 INSIG2Q9Y5U4 225 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 PPIAL4CA0A0B4J2A2 164 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 PPIAL4GP0DN37 164 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 SPCS1Q9Y6A9 102 aa11.32□□□□□ -0.6
SFSWAP-210ENST00000541286 PSMB11A5LHX3 300 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 K7ERJ3 54 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 TEX36Q5VZQ5 186 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 WFDC11Q8NEX6 87 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 LOXL1Q08397 574 aaPredicted RBP11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 Q9H3A6 140 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 HBBP68871 147 aa11.31□□□□□ -0.6
SFSWAP-210ENST00000541286 TMSB15BA0A087X1C1 80 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 COX19Q49B96 90 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 RNF223E7ERA6 249 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 GPR82Q96P67 336 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
SFSWAP-210ENST00000541286 SMAD7O15105 426 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-210ENST00000541286 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
SFSWAP-210ENST00000541286 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-210ENST00000541286 KLRD1Q13241 179 aa11.29□□□□□ -0.6
SFSWAP-210ENST00000541286 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-210ENST00000541286 BMI1P35226 326 aa11.28□□□□□ -0.6
SFSWAP-210ENST00000541286 LCNL1Q6ZST4 164 aa11.28□□□□□ -0.6
SFSWAP-210ENST00000541286 PRSS3P2Q8NHM4 247 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms