RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 BVES-AS1Q5T3Y7 98 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
RNF4-222ENST00000541204 BPESC1Q9GZL8 116 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 MUC21A0A0G2JKD1 596 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 TRBV6-1A0A0K0K1D8 114 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 MUC21A0A140T8X8 626 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
RNF4-222ENST00000541204 PCP4P48539 62 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 MUC21Q5SSG8 566 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 ZNF491Q8N8L2 437 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 CACNA1AO00555 2505 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 ZFYVE26Q68DK2 2539 aa9.81□□□□□ -0.84
RNF4-222ENST00000541204 ODF3BA8MYP8 253 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 K7EQM0 130 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 FAM106CPP0CH98 169 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 FAM106AQ4KMX7 169 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 RNF125Q96EQ8 232 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 A0A087X0K7 114 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 TAX1BP3O14907 124 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 NCR2O95944 276 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 LINC01545Q5VT33 79 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 PRSS3P2Q8NHM4 247 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 ZNF414Q96IQ9 312 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 TMSB15BA0A087X1C1 80 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 NDPQ00604 133 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 C5orf64Q2M2E5 130 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 RNF5Q99942 180 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 ZNF747Q9BV97 191 aa9.8□□□□□ -0.84
RNF4-222ENST00000541204 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
RNF4-222ENST00000541204 SNAI2O43623 268 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 FOXE3Q13461 319 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 FA2HQ7L5A8 372 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 MYO18BQ8IUG5 2567 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 LOC389332A0A1B0GUA5 103 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 SERTM2A0A1B0GWG4 89 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 OR2T8A6NH00 312 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 IFI27P40305 119 aaPredicted RBP9.79□□□□□ -0.84
RNF4-222ENST00000541204 RBX1P62877 108 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 RNF24Q9Y225 148 aa9.79□□□□□ -0.84
RNF4-222ENST00000541204 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 CBY3A6NI87 242 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 EFNA4P52798 201 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 LOXL1Q08397 574 aaPredicted RBP9.78□□□□□ -0.84
RNF4-222ENST00000541204 LYPD1Q8N2G4 141 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 CSMD2Q7Z408 3487 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 TMEM213A2RRL7 107 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 K7EP13 123 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 TMEM11P17152 192 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 C12orf54Q6X4T0 127 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 GATD1Q8NB37 220 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 OR10AG1Q8NH19 301 aa9.78□□□□□ -0.84
RNF4-222ENST00000541204 D6R8Y8 96 aa9.77□□□□□ -0.84
RNF4-222ENST00000541204 CT45A10P0DMU9 189 aa9.77□□□□□ -0.84
RNF4-222ENST00000541204 CSN1S1P47710 185 aa9.77□□□□□ -0.84
RNF4-222ENST00000541204 LYZL1Q6UWQ5 148 aa9.77□□□□□ -0.84
RNF4-222ENST00000541204 NPBQ8NG41 125 aa9.77□□□□□ -0.84
RNF4-222ENST00000541204 USP9XQ93008 2570 aaPredicted RBP9.77□□□□□ -0.85
RNF4-222ENST00000541204 IGHV3OR16-8A0A075B7F1 116 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 TRAV30A0A087WSZ9 112 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 IGHV3-35A0A0C4DH35 117 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 WI2-2373I1.2A0A1W2PRP0 233 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 GNG7O60262 68 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 NDUFA3O95167 84 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 ARPC1AQ92747 370 aa9.77□□□□□ -0.85
RNF4-222ENST00000541204 SRSF8Q9BRL6 282 aaKnown RBP9.77□□□□□ -0.85
RNF4-222ENST00000541204 A0A096LNJ9 63 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 A0A1B0GW15 77 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 FXYD7P58549 80 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 HIST1H1AQ02539 215 aaPredicted RBP9.76□□□□□ -0.85
RNF4-222ENST00000541204 AMN1Q8IY45 258 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 SIRPDQ9H106 197 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 AAMDCQ9H7C9 122 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 GPR183P32249 361 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 Q6AWC8 147 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 CCDC144NLQ6NUI1 221 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 SIGLEC8Q9NYZ4 499 aa9.76□□□□□ -0.85
RNF4-222ENST00000541204 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 COX8AP10176 69 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 ZNF493Q6ZR52 646 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 CENPEQ02224 2701 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 IGKV2-40A0A087WW87 121 aaPredicted RBP9.75□□□□□ -0.85
RNF4-222ENST00000541204 SH2D1AO60880 128 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 IGKV2D-40P01614 121 aaPredicted RBP9.75□□□□□ -0.85
RNF4-222ENST00000541204 SAA4P35542 130 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 TCTAP57738 103 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 LMO4P61968 165 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 RHOGP84095 191 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 AMMECR1LQ6DCA0 310 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 ZNF562Q6V9R5 426 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 C2orf91Q6ZV80 131 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 FANCD2OSQ96PS1 177 aa9.75□□□□□ -0.85
RNF4-222ENST00000541204 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms