RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ID1P41134 155 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 SULT1A2P50226 295 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
UBC-208ENST00000540700 PQLC2Q6ZP29 291 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 ZMAT4Q9H898 229 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 MAP1LC3B2A6NCE7 125 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 M0R3E3 92 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 GUK1Q16774 197 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 ALKAL2Q6UX46 152 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 SLC50A1Q9BRV3 221 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 MAP1LC3BQ9GZQ8 125 aa12.28□□□□□ -0.44
UBC-208ENST00000540700 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
UBC-208ENST00000540700 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
UBC-208ENST00000540700 C4BPBP20851 252 aa12.27□□□□□ -0.45
UBC-208ENST00000540700 CMC4P56277 68 aaPredicted RBP12.27□□□□□ -0.45
UBC-208ENST00000540700 PDE6HQ13956 83 aa12.27□□□□□ -0.45
UBC-208ENST00000540700 PSG3Q16557 428 aa12.27□□□□□ -0.45
UBC-208ENST00000540700 ACTL10Q5JWF8 245 aa12.27□□□□□ -0.45
UBC-208ENST00000540700 LRRC20Q8TCA0 184 aa12.27□□□□□ -0.45
UBC-208ENST00000540700 MBD3L1Q8WWY6 194 aa12.27□□□□□ -0.45
UBC-208ENST00000540700 A0A1B0GV50 99 aa12.26□□□□□ -0.45
UBC-208ENST00000540700 CXorf1O96002 111 aa12.26□□□□□ -0.45
UBC-208ENST00000540700 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
UBC-208ENST00000540700 SAMD13Q5VXD3 122 aa12.26□□□□□ -0.45
UBC-208ENST00000540700 TRPT1Q86TN4 253 aaKnown RBP12.26□□□□□ -0.45
UBC-208ENST00000540700 ZNF738Q8NE65 137 aa12.26□□□□□ -0.45
UBC-208ENST00000540700 SAV1Q9H4B6 383 aaPredicted RBP12.26□□□□□ -0.45
UBC-208ENST00000540700 TUBA4BQ9H853 241 aa12.26□□□□□ -0.45
UBC-208ENST00000540700 A0A0J9YX75 114 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 H3BMM0 161 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 HLA-DRB4P13762 266 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
UBC-208ENST00000540700 ICAM4Q14773 271 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 EIF5AL1Q6IS14 154 aaKnown RBP12.25□□□□□ -0.45
UBC-208ENST00000540700 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 FOXI2Q6ZQN5 318 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 Q9H3A6 140 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 HLA-DRB4X5D2U9 266 aa12.25□□□□□ -0.45
UBC-208ENST00000540700 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
UBC-208ENST00000540700 CCL20P78556 96 aa12.24□□□□□ -0.45
UBC-208ENST00000540700 SFT2D1Q8WV19 159 aa12.24□□□□□ -0.45
UBC-208ENST00000540700 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
UBC-208ENST00000540700 YTHDF2Q9Y5A9 579 aaKnown RBP12.24□□□□□ -0.45
UBC-208ENST00000540700 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
UBC-208ENST00000540700 LOC102724200A0A096LPH7 203 aaPredicted RBP12.23□□□□□ -0.45
UBC-208ENST00000540700 A8MTW9 85 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 RAB5CP51148 216 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 PSG9Q00887 426 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 OR8A1Q8NGG7 326 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 AGRNO00468 2067 aa12.23□□□□□ -0.45
UBC-208ENST00000540700 H2AFB1P0C5Y9 115 aa12.22□□□□□ -0.45
UBC-208ENST00000540700 CNN1P51911 297 aaKnown RBP12.22□□□□□ -0.45
UBC-208ENST00000540700 HAGHQ16775 308 aa12.22□□□□□ -0.45
UBC-208ENST00000540700 AMTNQ6UX39 209 aa12.22□□□□□ -0.45
UBC-208ENST00000540700 STHQ8IWL8 128 aa12.22□□□□□ -0.45
UBC-208ENST00000540700 MRPL53Q96EL3 112 aaKnown RBP12.22□□□□□ -0.45
UBC-208ENST00000540700 OTORQ9NRC9 128 aa12.22□□□□□ -0.45
UBC-208ENST00000540700 TMEM167BQ9NRX6 74 aa12.22□□□□□ -0.45
UBC-208ENST00000540700 IGKV2-40A0A087WW87 121 aaPredicted RBP12.21□□□□□ -0.45
UBC-208ENST00000540700 PGPA6NDG6 321 aa12.21□□□□□ -0.45
UBC-208ENST00000540700 IGKV2D-40P01614 121 aaPredicted RBP12.21□□□□□ -0.45
UBC-208ENST00000540700 UBE2G2P60604 165 aa12.21□□□□□ -0.45
UBC-208ENST00000540700 GNG5P63218 68 aa12.21□□□□□ -0.45
UBC-208ENST00000540700 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
UBC-208ENST00000540700 FAM74A7A6NL05 159 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 ZNF705EA8MWA4 302 aaPredicted RBP12.2□□□□□ -0.46
UBC-208ENST00000540700 FXYD7P58549 80 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 HIST1H1AQ02539 215 aaPredicted RBP12.2□□□□□ -0.46
UBC-208ENST00000540700 ERCC8Q13216 396 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 AAMDCQ9H7C9 122 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 RETNQ9HD89 108 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 CLEC5AQ9NY25 188 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 PRELID1Q9Y255 219 aa12.2□□□□□ -0.46
UBC-208ENST00000540700 TRAV1-1A0A0B4J248 108 aa12.19□□□□□ -0.46
UBC-208ENST00000540700 EBLN2Q6P2I7 272 aa12.19□□□□□ -0.46
UBC-208ENST00000540700 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
UBC-208ENST00000540700 OR4B1Q8NGF8 309 aa12.19□□□□□ -0.46
UBC-208ENST00000540700 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
UBC-208ENST00000540700 VGLL1Q99990 258 aa12.19□□□□□ -0.46
UBC-208ENST00000540700 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
UBC-208ENST00000540700 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
UBC-208ENST00000540700 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
UBC-208ENST00000540700 ATP5G3P48201 142 aa12.18□□□□□ -0.46
UBC-208ENST00000540700 TM2D3Q9BRN9 247 aa12.18□□□□□ -0.46
UBC-208ENST00000540700 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
UBC-208ENST00000540700 IFITM2Q01629 132 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 KIR3DS1Q14943 382 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 CCDC28AQ8IWP9 274 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 CLUHP3Q96NS8 147 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 CSTL1Q9H114 145 aa12.17□□□□□ -0.46
UBC-208ENST00000540700 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms