RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 C16orf74Q96GX8 76 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 LINC01587Q99440 93 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 PFDN5Q99471 154 aa9.22□□□□□ -0.93
SEMA4D-223ENST00000540475 TRAV5A0A0B4J249 113 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 H7BYZ3 331 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 HTN3P15516 51 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 RAB32Q13637 225 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 FCN2Q15485 313 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 MZT2BQ6NZ67 158 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 LINC00612Q8N6U2 182 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 SLC39A9Q9NUM3 307 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 PPP1R14DQ9NXH3 145 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 ZNF586Q9NXT0 402 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 TMEM14CQ9P0S9 112 aa9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 TIMM8BQ9Y5J9 83 aaPredicted RBP9.21□□□□□ -0.94
SEMA4D-223ENST00000540475 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 MPDU1O75352 247 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 SNRPCP09234 159 aaKnown RBP9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 HBG1P69891 147 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 HBG2P69892 147 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 STX12Q86Y82 276 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 OR10J6PQ8NGY7 276 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 LRP1BQ9NZR2 4599 aa9.2□□□□□ -0.94
SEMA4D-223ENST00000540475 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 M0R2N4 97 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 ATP5G1P05496 136 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 DEFB130BP0DP73 79 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 DEFB130AP0DP74 79 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 ATP5G3P48201 142 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 GFI1BQ5VTD9 330 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 RYR1P21817 5038 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 PCLOQ9Y6V0 5065 aa9.19□□□□□ -0.94
SEMA4D-223ENST00000540475 TRBV19A0A075B6N1 114 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 UBE2L5PA0A1B0GUS4 154 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 H3BTX0 84 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 NDUFB4O95168 129 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 PRB4P10163 310 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 S100A10P60903 97 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 PDE6HQ13956 83 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 NMES1Q9C002 83 aa9.18□□□□□ -0.94
SEMA4D-223ENST00000540475 HSPG2P98160 4391 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 A6NHS1 94 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 UPK1BO75841 260 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 FGF7P21781 194 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 IFITM3Q01628 133 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 BAXQ07812 192 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 PARD6GQ9BYG4 376 aaPredicted RBP9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 PRELID1Q9Y255 219 aa9.17□□□□□ -0.94
SEMA4D-223ENST00000540475 DNAH5Q8TE73 4624 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 IGLV2-18A0A075B6J9 118 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 E5RGE8 158 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 F5H768 121 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 LEPP41159 167 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 NHLH2Q02577 135 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 ZNF503Q96F45 646 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 LINC00477Q96M19 166 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 GPN1Q9HCN4 374 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 NOP10Q9NPE3 64 aaKnown RBP9.16□□□□□ -0.94
SEMA4D-223ENST00000540475 KLLNB2CW77 178 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 H0YIZ8 118 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 PRAF2O60831 178 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 ZNF324O75467 553 aaPredicted RBP9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 SLC25A5P05141 298 aaKnown RBP9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 NMBP08949 121 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 HTN1P15515 57 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 CCDC28AQ8IWP9 274 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 C18orf15Q96N68 181 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 SLC25A2Q9BXI2 301 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 SLC25A31Q9H0C2 315 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 OR5AC2Q9NZP5 309 aa9.15□□□□□ -0.94
SEMA4D-223ENST00000540475 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 H3BNG1 76 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 M0R3E3 92 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 RLN2P04090 185 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 PYYP10082 97 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 CRISP2P16562 243 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 CYCSP99999 105 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 GCSAMLQ5JQS6 135 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 SOHLH1Q5JUK2 328 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 C1orf134Q5TEV5 83 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 ENKURQ8TC29 256 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 RNF141Q8WVD5 230 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms