RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SNRPD3P62318 126 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 PSMG4Q5JS54 123 aa14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 RXFP4Q8TDU9 374 aa14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 CLEC5AQ9NY25 188 aa14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 VAX2Q9UIW0 290 aa14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 SLC25A5P05141 298 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 CD7P09564 240 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 TAGLN2P37802 199 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 DEFB1P60022 68 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 GNG5P63218 68 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ODF3L2Q3SX64 289 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ZNF506Q5JVG8 444 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 NKX6-2Q9C056 277 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 EIF5A2Q9GZV4 153 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 MAP6D1Q9H9H5 199 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 PRELID1Q9Y255 219 aa14.09□□□□□ -0.15
TNFRSF1A-213ENST00000540022 PRAC2D3DTV9 90 aa14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 DEFB131AP59861 70 aa14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 CD81P60033 236 aa14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 SRSF3P84103 164 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 MEF2BQ02080 365 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 C5orf17Q8NAS9 161 aa14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 ZNF738Q8NE65 137 aa14.08□□□□□ -0.16
TNFRSF1A-213ENST00000540022 LINC00862A6NCI5 91 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 KRTAP10-11P60412 298 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 EGFEM1PQ0D2K5 195 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 CMTM2Q8TAZ6 248 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 RPUSD4Q96CM3 377 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 MRPL53Q96EL3 112 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 MED9Q9NWA0 146 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 EPDR1Q9UM22 224 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 RPH3ALQ9UNE2 315 aa14.07□□□□□ -0.16
TNFRSF1A-213ENST00000540022 KPRPQ5T749 579 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-213ENST00000540022 TXNDC17Q9BRA2 123 aa14.06□□□□□ -0.16
TNFRSF1A-213ENST00000540022 C19orf73Q9NVV2 129 aa14.06□□□□□ -0.16
TNFRSF1A-213ENST00000540022 F6UB75 175 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 CSN1S1P47710 185 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 ZNF124Q15973 351 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 SCO2A0A1W2PP80 73 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 RAB19A4D1S5 217 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 DIRC3C9JPN6 131 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 TCRAP04437 139 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 APRG1Q8IVJ8 170 aa14.05□□□□□ -0.16
TNFRSF1A-213ENST00000540022 IGKV2-40A0A087WW87 121 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 OR11H12B2RN74 326 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 C9JQL5 133 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 IGKV2D-40P01614 121 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 ZNF705DP0CH99 300 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 ZNF705BP0CI00 300 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 GDF5OSQ5U4N7 250 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 GOLT1AQ6ZVE7 132 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 COMMD7Q86VX2 200 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 ARL6IP6Q8N6S5 226 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 WFDC10AQ9H1F0 79 aa14.04□□□□□ -0.16
TNFRSF1A-213ENST00000540022 PEX7O00628 323 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 PRB2P02812 416 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 CMC4P56277 68 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 GTSCR1Q86UQ5 136 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 HIST1H2BAQ96A08 127 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 PRR25Q96S07 402 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 FAM110AQ9BQ89 295 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 TCEAL7Q9BRU2 100 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 ATG101Q9BSB4 218 aa14.03□□□□□ -0.16
TNFRSF1A-213ENST00000540022 KNCNA6PVL3 124 aa14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 PDE6DO43924 150 aa14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 SRP19P09132 144 aaKnown RBP14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 PEA15Q15121 130 aa14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 OR8A1Q8NGG7 326 aa14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 C11orf52Q96A22 123 aa14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 LINC00479Q96M42 142 aa14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 SAV1Q9H4B6 383 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1A-213ENST00000540022 A0A0J9YX75 114 aa14.01□□□□□ -0.17
TNFRSF1A-213ENST00000540022 F6UZH7 168 aa14.01□□□□□ -0.17
TNFRSF1A-213ENST00000540022 FOXI2Q6ZQN5 318 aa14.01□□□□□ -0.17
TNFRSF1A-213ENST00000540022 Q8N1Y9 231 aa14.01□□□□□ -0.17
TNFRSF1A-213ENST00000540022 CYB561D1Q8N8Q1 229 aa14.01□□□□□ -0.17
TNFRSF1A-213ENST00000540022 C2CD4CQ8TF44 421 aa14.01□□□□□ -0.17
TNFRSF1A-213ENST00000540022 TRAV8-1A0A0A6YYK1 113 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 HIST1H1AQ02539 215 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 ERCC8Q13216 396 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 SGK494Q96LW2 274 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 CITED4Q96RK1 184 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 VGLL1Q99990 258 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 SMDT1Q9H4I9 107 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 TREM1Q9NP99 234 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 ZMAT5Q9UDW3 170 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 TRAV34A0A0B4J273 112 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 RBAKDNA6NC62 111 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 TMEM250H0YL14 139 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 NDUFS6O75380 124 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 ACTL10Q5JWF8 245 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 EBLN2Q6P2I7 272 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 OR10J6PQ8NGY7 276 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 DERL1Q9BUN8 251 aa14□□□□□ -0.17
TNFRSF1A-213ENST00000540022 SERTM2A0A1B0GWG4 89 aa13.99□□□□□ -0.17
TNFRSF1A-213ENST00000540022 IGLV2-11P01706 119 aa13.99□□□□□ -0.17
TNFRSF1A-213ENST00000540022 AKR1C3P42330 323 aa13.99□□□□□ -0.17
TNFRSF1A-213ENST00000540022 CNN1P51911 297 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-213ENST00000540022 EIF4E3Q8N5X7 224 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-213ENST00000540022 DEFB125Q8N687 156 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms