RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 TMEM75Q8N9X5 138 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 NTN5Q8WTR8 489 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 CYB5D2Q8WUJ1 264 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 CHCHD5Q9BSY4 110 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 SHANK2-AS3Q9BTD1 123 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 DYNLRB1Q9NP97 96 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 KLF13Q9Y2Y9 288 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 KIAA1549Q9HCM3 1950 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 PRSS38A1L453 326 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 TIMM8AO60220 97 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-211ENST00000539921 COX7A2P2O60397 106 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 FSTL3O95633 263 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 ELANEP08246 267 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 ARMS2P0C7Q2 107 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 COX6B1P14854 86 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 EFNA4P52798 201 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 PRCDQ00LT1 54 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 CD69Q07108 199 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 LOXL1Q08397 574 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-211ENST00000539921 TMEM30BQ3MIR4 351 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 C10orf113Q5VZT2 155 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 ZFP2Q6ZN57 461 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 GTSCR1Q86UQ5 136 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 DAND5Q8N907 189 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 THAP8Q8NA92 274 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 AGPAT4-IT1Q9H0P7 198 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 TMEM14CQ9P0S9 112 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 DKK4Q9UBT3 224 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 TP53TG1Q9Y2A0 90 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 PCDH15Q96QU1 1955 aa4.82□□□□□ -1.64
SNHG1-211ENST00000539921 MYO7BQ6PIF6 2116 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 TRAV12-2A0A075B6T6 113 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 TRAV13-1A0A0B4J241 112 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 A0A0G2JNJ9 132 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 UPK2O00526 184 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 TM4SF5O14894 197 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 KLK10O43240 276 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 COX6A1P12074 109 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 LIFP15018 202 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 PLA2G5P39877 138 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 NXPH1P58417 271 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 MRPL51Q4U2R6 128 aaKnown RBP4.81□□□□□ -1.64
SNHG1-211ENST00000539921 SIGLEC15Q6ZMC9 328 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 C1orf158Q8N1D5 194 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 SERP2Q8N6R1 65 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 MAPKAPK5-AS1Q8N8E1 139 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 METTL26Q96S19 204 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 FOXC2Q99958 501 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 PEMTQ9UBM1 199 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 Q9UFV3 132 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 CEP192Q8TEP8 1941 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 MYOFQ9NZM1 2061 aa4.81□□□□□ -1.64
SNHG1-211ENST00000539921 EML6Q6ZMW3 1958 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 EXPH5Q8NEV8 1989 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 H3BVH4 76 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 J3QQQ9 107 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 BCE1O60756 84 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 IGHV3-33P01772 117 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 CFC1P0CG37 223 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 CKS2P33552 79 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 LEPP41159 167 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 HERVK_113P61574 105 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 SRSF9Q13242 221 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNHG1-211ENST00000539921 PLGLAQ15195 96 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 HES3Q5TGS1 186 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 LINC00322Q6ZN03 302 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-211ENST00000539921 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 MRPL35Q9NZE8 188 aaKnown RBP4.8□□□□□ -1.64
SNHG1-211ENST00000539921 LAMTOR3Q9UHA4 124 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 LINC00527Q9UJ94 153 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
SNHG1-211ENST00000539921 PTPRBP23467 1997 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 TRAV40A0A0B4J280 105 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 A0A0J9YX75 114 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 LINC00473A8K010 186 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 C17orf100A8MU93 164 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 C12orf77C9JDV5 145 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 MRPS12O15235 138 aaKnown RBP4.79□□□□□ -1.64
SNHG1-211ENST00000539921 NBR2O15453 112 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 EFNA2O43921 213 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 WISP1O95388 367 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 IGLV2-11P01706 119 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 COX6CP09669 75 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 GP9P14770 177 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 CD40P25942 277 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 PFN2P35080 140 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 FKBP1BP68106 108 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 RPL18AQ02543 176 aaKnown RBP4.79□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF56Q15929 161 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 TMEM155Q4W5P6 130 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 LILRA6Q6PI73 481 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms