RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 LINC00322Q6ZN03 302 aaPredicted RBP17.2■□□□□ 0.34
HOMER3-204ENST00000539827 TMEM89A2RUT3 159 aa17.2■□□□□ 0.34
HOMER3-204ENST00000539827 ZNF253O75346 499 aa17.2■□□□□ 0.34
HOMER3-204ENST00000539827 SLC35B1P78383 322 aa17.2■□□□□ 0.34
HOMER3-204ENST00000539827 PSG3Q16557 428 aa17.2■□□□□ 0.34
HOMER3-204ENST00000539827 TRBV6-1A0A0K0K1D8 114 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 PHOX2AO14813 284 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 TRGC1P0CF51 173 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 C16orf54Q6UWD8 224 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 TMEM183AQ8IXX5 376 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 IGKV2-40A0A087WW87 121 aaPredicted RBP17.19■□□□□ 0.34
HOMER3-204ENST00000539827 ZNF705FA8MVS1 300 aaPredicted RBP17.19■□□□□ 0.34
HOMER3-204ENST00000539827 IGKV2D-40P01614 121 aaPredicted RBP17.19■□□□□ 0.34
HOMER3-204ENST00000539827 S100A2P29034 98 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 FAM209BQ5JX69 171 aa17.19■□□□□ 0.34
HOMER3-204ENST00000539827 CHEK1O14757 476 aa17.18■□□□□ 0.34
HOMER3-204ENST00000539827 RNF182Q8N6D2 247 aa17.17■□□□□ 0.34
HOMER3-204ENST00000539827 GRAMD2BQ96HH9 432 aa17.17■□□□□ 0.34
HOMER3-204ENST00000539827 SPINK4O60575 86 aa17.17■□□□□ 0.34
HOMER3-204ENST00000539827 GLMPQ8WWB7 406 aa17.17■□□□□ 0.34
HOMER3-204ENST00000539827 TRAV9-1A0A075B6T8 112 aa17.16■□□□□ 0.34
HOMER3-204ENST00000539827 SMIM27A0A1W2PRY6 76 aa17.16■□□□□ 0.34
HOMER3-204ENST00000539827 FOXE3Q13461 319 aa17.16■□□□□ 0.34
HOMER3-204ENST00000539827 ZNF492Q9P255 531 aa17.16■□□□□ 0.34
HOMER3-204ENST00000539827 FLNAP21333 2647 aaKnown RBP17.16■□□□□ 0.34
HOMER3-204ENST00000539827 ELANEP08246 267 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 FRMD6-AS1P0C7T7 363 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 TM4SF20Q53R12 229 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 ACTL10Q5JWF8 245 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 LCN12Q6JVE5 192 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 Q8N2B8 174 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 TMEM86BQ8N661 226 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 C19orf71A6NCJ1 209 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 ZC2HC1AQ96GY0 325 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 SLC50A1Q9BRV3 221 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 ZFP30Q9Y2G7 519 aa17.15■□□□□ 0.34
HOMER3-204ENST00000539827 MXRA5Q9NR99 2828 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 TLN2Q9Y4G6 2542 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 TRAV8-2A0A0B4J237 113 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 SERTM2A0A1B0GWG4 89 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 DNAJC9-AS1A6NH13 148 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 C8orf86Q6ZUL3 223 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 GBGT1Q8N5D6 347 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 DAZAP1Q96EP5 407 aaKnown RBP17.14■□□□□ 0.33
HOMER3-204ENST00000539827 C8orf49Q96NF6 230 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 TRAPPC1Q9Y5R8 145 aa17.14■□□□□ 0.33
HOMER3-204ENST00000539827 PRAC2D3DTV9 90 aa17.13■□□□□ 0.33
HOMER3-204ENST00000539827 ARL6IP6Q8N6S5 226 aa17.13■□□□□ 0.33
HOMER3-204ENST00000539827 VGLL1Q99990 258 aa17.13■□□□□ 0.33
HOMER3-204ENST00000539827 P01737 135 aa17.13■□□□□ 0.33
HOMER3-204ENST00000539827 EDN2P20800 178 aa17.13■□□□□ 0.33
HOMER3-204ENST00000539827 RPP21Q9H633 154 aaKnown RBP17.13■□□□□ 0.33
HOMER3-204ENST00000539827 SELENOKQ9Y6D0 94 aa17.13■□□□□ 0.33
HOMER3-204ENST00000539827 NOTCH2Q04721 2471 aa17.12■□□□□ 0.33
HOMER3-204ENST00000539827 IGHV7-4-1A0A0J9YVY3 117 aa17.12■□□□□ 0.33
HOMER3-204ENST00000539827 FAM181BA6NEQ2 426 aa17.12■□□□□ 0.33
HOMER3-204ENST00000539827 FAM106AQ4KMX7 169 aa17.12■□□□□ 0.33
HOMER3-204ENST00000539827 HIST3H2BBQ8N257 126 aa17.12■□□□□ 0.33
HOMER3-204ENST00000539827 MYOZ3Q8TDC0 251 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 ESM1Q9NQ30 184 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 NIT2Q9NQR4 276 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 A0A1W2PS18 150 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 IZUMO1RA6ND01 250 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 CBLN1P23435 193 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 ERCC8Q13216 396 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 MRPL54Q6P161 138 aaKnown RBP17.11■□□□□ 0.33
HOMER3-204ENST00000539827 GPHB5Q86YW7 130 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 RHPN1-AS1Q9BWJ2 59 aa17.11■□□□□ 0.33
HOMER3-204ENST00000539827 SONP18583 2426 aaKnown RBP17.1■□□□□ 0.33
HOMER3-204ENST00000539827 AKAP9Q99996 3911 aa17.1■□□□□ 0.33
HOMER3-204ENST00000539827 LGALS1P09382 135 aaKnown RBP17.1■□□□□ 0.33
HOMER3-204ENST00000539827 Q8TAT8 98 aa17.1■□□□□ 0.33
HOMER3-204ENST00000539827 TSKUQ8WUA8 353 aa17.1■□□□□ 0.33
HOMER3-204ENST00000539827 C16orf92Q96LL3 132 aa17.1■□□□□ 0.33
HOMER3-204ENST00000539827 IFITM10A6NMD0 228 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 SMR3AQ99954 134 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 DAZ1Q9NQZ3 744 aaKnown RBP17.09■□□□□ 0.33
HOMER3-204ENST00000539827 CRIP1P50238 77 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 Q6ZSV7 163 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 TCF24Q7RTU0 167 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 RNF152Q8N8N0 203 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 NUP35Q8NFH5 326 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 NEU1Q99519 415 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 SMPXQ9UHP9 88 aa17.09■□□□□ 0.33
HOMER3-204ENST00000539827 IGHV4OR15-8A0A075B7B6 117 aa17.08■□□□□ 0.33
HOMER3-204ENST00000539827 A0A087WW49 117 aa17.08■□□□□ 0.33
HOMER3-204ENST00000539827 KLHDC1Q8N7A1 406 aa17.08■□□□□ 0.33
HOMER3-204ENST00000539827 UBE2E2Q96LR5 201 aa17.08■□□□□ 0.33
HOMER3-204ENST00000539827 K7EMT4 169 aa17.08■□□□□ 0.32
HOMER3-204ENST00000539827 RPL11P62913 178 aaKnown RBP17.08■□□□□ 0.32
HOMER3-204ENST00000539827 C18orf65Q6ZTR6 163 aa17.08■□□□□ 0.32
HOMER3-204ENST00000539827 NAT8BQ9UHF3 227 aa17.08■□□□□ 0.32
HOMER3-204ENST00000539827 IGKV3-7A0A075B6H7 116 aa17.07■□□□□ 0.32
HOMER3-204ENST00000539827 SNURFLB1AK76 121 aa17.07■□□□□ 0.32
HOMER3-204ENST00000539827 COA6Q5JTJ3 125 aaKnown RBP17.07■□□□□ 0.32
HOMER3-204ENST00000539827 OR2D3Q8NGH3 330 aa17.07■□□□□ 0.32
HOMER3-204ENST00000539827 PRR25Q96S07 402 aa17.07■□□□□ 0.32
HOMER3-204ENST00000539827 HIGD1CA8MV81 97 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 A8MWL6 223 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 NPIPB6E9PJ23 425 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms