RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PQLC2Q6ZP29 291 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 C9orf62Q8N4C0 152 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 RPUSD4Q96CM3 377 aaKnown RBP9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 PHYHIPLQ96FC7 376 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 RCHY1Q96PM5 261 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 CLEC5AQ9NY25 188 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 U3KQK5 164 aa9.31□□□□□ -0.92
TSPAN9-207ENST00000539631 A8MTW9 85 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 PRAC2D3DTV9 90 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 M0R3E3 92 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 ARL14EPLP0DKL9 152 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 EIF5AP63241 154 aaKnown RBP9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 ICAM4Q14773 271 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 Q6ZWC4 215 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 OR8A1Q8NGG7 326 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 STOML3Q8TAV4 291 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 OVOL2Q9BRP0 275 aa9.3□□□□□ -0.92
TSPAN9-207ENST00000539631 CTXND1A0A1B0GTU2 59 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 SPRY2O43597 315 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 NKX2-5P52952 324 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 RANP62826 216 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 HIST1H1AQ02539 215 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 RNF183Q96D59 192 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 CLUHP3Q96NS8 147 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 SLC35B3Q9H1N7 401 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 PRELID1Q9Y255 219 aa9.29□□□□□ -0.92
TSPAN9-207ENST00000539631 CXorf1O96002 111 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 GCHFRP30047 84 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 FHITP49789 147 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 NUTF2P61970 127 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 AMTNQ6UX39 209 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 SLC51BQ86UW2 128 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 Q9H3A6 140 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 TP53TG1Q9Y2A0 90 aa9.28□□□□□ -0.92
TSPAN9-207ENST00000539631 FGF8P55075 233 aaPredicted RBP9.27□□□□□ -0.93
TSPAN9-207ENST00000539631 IQCF2Q8IXL9 164 aa9.27□□□□□ -0.93
TSPAN9-207ENST00000539631 LYPD1Q8N2G4 141 aa9.27□□□□□ -0.93
TSPAN9-207ENST00000539631 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
TSPAN9-207ENST00000539631 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
TSPAN9-207ENST00000539631 MAP1LC3B2A6NCE7 125 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 PGPA6NDG6 321 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 UMAD1C9J7I0 102 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 ERCC8Q13216 396 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 CSNK1G2-AS1Q8NCQ2 148 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 MAP1LC3BQ9GZQ8 125 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 TMPRSS5Q9H3S3 457 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 TMEM167BQ9NRX6 74 aa9.26□□□□□ -0.93
TSPAN9-207ENST00000539631 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 NPIPB6E9PJ23 425 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 M0R2Z0 102 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 SPINK13Q1W4C9 94 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 OTORQ9NRC9 128 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 PPP1R14DQ9NXH3 145 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
TSPAN9-207ENST00000539631 BOLA2-SMG1P6H3BVE0 249 aa9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 EIF5AL1Q6IS14 154 aaKnown RBP9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 DPPA3Q6W0C5 159 aa9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 OR11H2Q8NH07 326 aa9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 MBD3L1Q8WWY6 194 aa9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 RARRES2Q99969 163 aa9.24□□□□□ -0.93
TSPAN9-207ENST00000539631 TRAV12-2A0A075B6T6 113 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 CRXO43186 299 aaPredicted RBP9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 AMBPP02760 352 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 CSN1S1P47710 185 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 SULT1A2P50226 295 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 UBE2G2P60604 165 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 FAM74A1Q5RGS3 127 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 CMTM2Q8TAZ6 248 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 RXFP4Q8TDU9 374 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 SFT2D1Q8WV19 159 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 VGLL1Q99990 258 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 RPH3ALQ9UNE2 315 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 X6R8D5 127 aa9.23□□□□□ -0.93
TSPAN9-207ENST00000539631 A0A1B0GV50 99 aa9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 SLC25A5P05141 298 aaKnown RBP9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 GNG5P63218 68 aa9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 C1orf158Q8N1D5 194 aa9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 EDA2RQ9HAV5 297 aa9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 YTHDF2Q9Y5A9 579 aaKnown RBP9.22□□□□□ -0.93
TSPAN9-207ENST00000539631 IGHV3OR16-12A0A075B7B8 117 aa9.21□□□□□ -0.94
TSPAN9-207ENST00000539631 A0A0J9YWU9 116 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms