RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 DPPA3Q6W0C5 159 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 C1orf158Q8N1D5 194 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 ANKRD29Q8N6D5 301 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 ULBP3Q9BZM4 244 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 VPS29Q9UBQ0 182 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 SPAG17Q6Q759 2223 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 RTTNQ86VV8 2226 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 PRRC2CQ9Y520 2896 aaKnown RBP1.98□□□□□ -2.09
TRAV11-201ENST00000539512 MED13Q9UHV7 2174 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 MYH3P11055 1940 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 OMPP47874 163 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 SPOPLQ6IQ16 392 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 LCN15Q6UWW0 184 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 C12orf29Q8N999 325 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 ANP32BQ92688 251 aaKnown RBP1.98□□□□□ -2.09
TRAV11-201ENST00000539512 RYR1P21817 5038 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 ANK2Q01484 3957 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 ZFC3H1O60293 1989 aaKnown RBP1.98□□□□□ -2.09
TRAV11-201ENST00000539512 PTPRBP23467 1997 aa1.98□□□□□ -2.09
TRAV11-201ENST00000539512 MYH13Q9UKX3 1938 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 IGKV2D-26A0A0A0MRZ7 120 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 SHBGP04278 402 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 ERVS71-1P61550 626 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 RANP62826 216 aaKnown RBP1.97□□□□□ -2.09
TRAV11-201ENST00000539512 CCL7P80098 99 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 DEFB109BQ30KR1 87 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 ALKAL1Q6UXT8 129 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 OR13C4Q8NGS5 318 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 DNAJC9Q8WXX5 260 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.97□□□□□ -2.09
TRAV11-201ENST00000539512 FBXL12Q9NXK8 326 aa1.97□□□□□ -2.09
TRAV11-201ENST00000539512 ZNF469Q96JG9 3925 aaPredicted RBP1.97□□□□□ -2.09
TRAV11-201ENST00000539512 MGAM2Q2M2H8 2515 aa1.96□□□□□ -2.09
TRAV11-201ENST00000539512 PCDH15Q96QU1 1955 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 SULT1B1O43704 296 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 IFNA10P01566 189 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 HTR1AP08908 422 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 CAPZBP47756 277 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 SNRPD2P62316 118 aaKnown RBP1.96□□□□□ -2.1
TRAV11-201ENST00000539512 TMED2Q15363 201 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 S100A7AQ86SG5 101 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 Q8N2B8 174 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 TMEM86BQ8N661 226 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 ZNF439Q8NDP4 499 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 PRAP1Q96NZ9 151 aa1.96□□□□□ -2.1
TRAV11-201ENST00000539512 MYH7BA7E2Y1 1941 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 ARL5CA6NH57 179 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 CLDN24A6NM45 220 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 KPNA3O00505 521 aaPredicted RBP1.95□□□□□ -2.1
TRAV11-201ENST00000539512 CNIH1O95406 144 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 CRYZL1O95825 349 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 PLCXD2Q0VAA5 305 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 SPA17Q15506 151 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 KISS1Q15726 138 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 KCNJ8Q15842 424 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 CLDN22Q8N7P3 220 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 PPP1R2P1Q96PQ5 205 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 C9orf16Q9BUW7 83 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 REG4Q9BYZ8 158 aa1.95□□□□□ -2.1
TRAV11-201ENST00000539512 WNK1Q9H4A3 2382 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 SVEP1Q4LDE5 3571 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 TRAV9-1A0A075B6T8 112 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 A0A0D9SG52 128 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 SMIM9A6NGZ8 99 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 C19orf84I3L1E1 186 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 SERPINA1P01009 418 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 HIST1H1TP22492 207 aaPredicted RBP1.94□□□□□ -2.1
TRAV11-201ENST00000539512 ACOT6Q3I5F7 207 aaPredicted RBP1.94□□□□□ -2.1
TRAV11-201ENST00000539512 AKIRIN2Q53H80 203 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 CLVS1Q8IUQ0 354 aaPredicted RBP1.94□□□□□ -2.1
TRAV11-201ENST00000539512 OR4E2Q8NGC2 313 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 OR4D11Q8NGI4 311 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 NIPSNAP1Q9BPW8 284 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 TRABDQ9H4I3 376 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 SLC39A9Q9NUM3 307 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 PKIGQ9Y2B9 76 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 TENM1Q9UKZ4 2725 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 PARP14Q460N5 1801 aa1.94□□□□□ -2.1
TRAV11-201ENST00000539512 KIAA2026Q5HYC2 2103 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 VWFP04275 2813 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 DPRXA6NFQ7 191 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 CHP2O43745 196 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 FADS1O60427 444 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 APODP05090 189 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 VBP1P61758 197 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 TAF1AQ15573 450 aaPredicted RBP1.93□□□□□ -2.1
TRAV11-201ENST00000539512 KHDC3LQ587J8 217 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 C10orf55Q5SWW7 151 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 MIR17HGQ75NE6 70 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 C15orf53Q8NAA6 179 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 TOMM6Q96B49 74 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 C11orf68Q9H3H3 251 aaKnown RBP1.93□□□□□ -2.1
TRAV11-201ENST00000539512 GLTPQ9NZD2 209 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 ARL2BPQ9Y2Y0 163 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 TMEM56-RWDD3S4R434 201 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 HELZP42694 1942 aaKnown RBP1.93□□□□□ -2.1
TRAV11-201ENST00000539512 DLG5Q8TDM6 1919 aa1.93□□□□□ -2.1
TRAV11-201ENST00000539512 PRKDCP78527 4128 aaKnown RBP1.93□□□□□ -2.1
TRAV11-201ENST00000539512 EML5Q05BV3 1969 aa1.92□□□□□ -2.1
TRAV11-201ENST00000539512 RPL5P46777 297 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms