RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 RNF152Q8N8N0 203 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 SNRNP40Q96DI7 357 aaKnown RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZFHX2Q9C0A1 2572 aaPredicted RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MGAQ8IWI9 3026 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 CNOT1A5YKK6 2376 aaKnown RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 SRRM4A7MD48 611 aaKnown RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 OOSP1A8MZH6 123 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LY6LH3BQJ8 138 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DLL1O00548 723 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TM4SF5O14894 197 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LYZL6O75951 148 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FGF12P61328 243 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 GNG5P63218 68 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PCSK4Q6UW60 755 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C11orf53Q8IXP5 236 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZNF442Q9H7R0 627 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 METRNQ9UJH8 293 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 RAXQ9Y2V3 346 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LSM4Q9Y4Z0 139 aaKnown RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 V9GYY9 64 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 WI2-2373I1.2A0A1W2PRP0 233 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C19orf71A6NCJ1 209 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HIGD1CA8MV81 97 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 K7EM74 188 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 OVOL1O14753 267 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 NPYP01303 97 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGLV2-14P01704 120 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 SPINK2P20155 84 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FOXA3P55318 350 aaPredicted RBP4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 KLRB1Q12918 225 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 Q6ZT83 130 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C15orf53Q8NAA6 179 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TMEM116Q8NCL8 245 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRR7Q8TB68 274 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FAM57AQ8TBR7 257 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZNF488Q96MN9 340 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MLST8Q9BVC4 326 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZNF492Q9P255 531 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 U3KQK5 164 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DEFA4P12838 97 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 NBL1P41271 181 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PDPNQ86YL7 162 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MKXQ8IYA7 352 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 CNEP1R1Q8N9A8 125 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C9orf106Q8NAJ2 232 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ATMQ13315 3056 aa4.56□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGKV2D-26A0A0A0MRZ7 120 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IL4P05112 153 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 EDN2P20800 178 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 CA6P23280 308 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C6orf226Q5I0X4 101 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DUX4L9Q6RFH8 374 aaPredicted RBP4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZNF414Q96IQ9 312 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C2orf48Q96LS8 159 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TRGV9Q99603 122 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 CHCHD5Q9BSY4 110 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 F11RQ9Y624 299 aaKnown RBP4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DOCK7Q96N67 2140 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 URB1O60287 2271 aaKnown RBP4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGKV1-6A0A0C4DH72 117 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LINC01548A6NM66 108 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HSPB6O14558 160 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 NBR2O15453 112 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TIMM8AO60220 97 aaPredicted RBP4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 COX7CP15954 63 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 CACNG7P62955 275 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FOXF2Q12947 444 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FOXC1Q12948 553 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MGST2Q99735 147 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DMXL2Q8TDJ6 3036 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TIMM23O14925 209 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 KLK10O43240 276 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 OXTP01178 125 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGKV3-15P01624 115 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGFL3Q6UXB1 125 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 WDR86Q86TI4 376 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C10orf126Q8N4M7 172 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ZNF808Q8N4W9 903 aaPredicted RBP4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 WDR31Q8NA23 367 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IFI27L1Q96BM0 104 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TIMD4Q96H15 378 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LINC00477Q96M19 166 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 JPT2Q9H910 190 aa4.55□□□□□ -1.68
RAB3GAP1-207ENST00000539493 RIF1Q5UIP0 2472 aaKnown RBP4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 RBAKDNA6NC62 111 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRR20EP86478 221 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRR20CP86479 221 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRR20DP86480 221 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRR20BP86481 221 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRR20AP86496 221 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 SLC25A48Q6ZT89 311 aaKnown RBP4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LINC00596Q86U02 117 aa4.54□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PLEKHB2Q96CS7 222 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms