RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DEFB130AP0DP74 79 aa15.68■□□□□ 0.1
SCARB1-206ENST00000539320 RPL29P47914 159 aaKnown RBP15.68■□□□□ 0.1
SCARB1-206ENST00000539320 LGALS9BQ3B8N2 356 aa15.68■□□□□ 0.1
SCARB1-206ENST00000539320 C15orf53Q8NAA6 179 aa15.68■□□□□ 0.1
SCARB1-206ENST00000539320 SLC39A9Q9NUM3 307 aa15.68■□□□□ 0.1
SCARB1-206ENST00000539320 TRAV5A0A0B4J249 113 aa15.67■□□□□ 0.1
SCARB1-206ENST00000539320 PRAC2D3DTV9 90 aa15.67■□□□□ 0.1
SCARB1-206ENST00000539320 GUK1Q16774 197 aa15.67■□□□□ 0.1
SCARB1-206ENST00000539320 RNF212Q495C1 297 aa15.67■□□□□ 0.1
SCARB1-206ENST00000539320 SAT2Q96F10 170 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-206ENST00000539320 C20orf144Q9BQM9 153 aa15.67■□□□□ 0.1
SCARB1-206ENST00000539320 GPN1Q9HCN4 374 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-206ENST00000539320 H7BYZ3 331 aa15.66■□□□□ 0.1
SCARB1-206ENST00000539320 HTN1P15515 57 aa15.66■□□□□ 0.1
SCARB1-206ENST00000539320 FGF7P21781 194 aa15.66■□□□□ 0.1
SCARB1-206ENST00000539320 ENKURQ8TC29 256 aa15.66■□□□□ 0.1
SCARB1-206ENST00000539320 PARD6GQ9BYG4 376 aaPredicted RBP15.66■□□□□ 0.1
SCARB1-206ENST00000539320 DNAH11Q96DT5 4516 aa15.66■□□□□ 0.1
SCARB1-206ENST00000539320 NACAE9PAV3 2078 aa15.65■□□□□ 0.1
SCARB1-206ENST00000539320 IGLV2-18A0A075B6J9 118 aa15.65■□□□□ 0.1
SCARB1-206ENST00000539320 ATP6V1FQ16864 119 aa15.65■□□□□ 0.1
SCARB1-206ENST00000539320 ZNF493Q6ZR52 646 aa15.65■□□□□ 0.1
SCARB1-206ENST00000539320 TMEM263Q8WUH6 116 aaKnown RBP15.65■□□□□ 0.1
SCARB1-206ENST00000539320 CHAC2Q8WUX2 184 aa15.65■□□□□ 0.1
SCARB1-206ENST00000539320 ZNF253O75346 499 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 ATP5G1P05496 136 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 ATP5G3P48201 142 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 KIR3DS1Q14943 382 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 FCN2Q15485 313 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 GFI1BQ5VTD9 330 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 RNASE8Q8TDE3 154 aaKnown RBP15.64■□□□□ 0.09
SCARB1-206ENST00000539320 ZNF586Q9NXT0 402 aa15.64■□□□□ 0.09
SCARB1-206ENST00000539320 TIMM8BQ9Y5J9 83 aaPredicted RBP15.64■□□□□ 0.09
SCARB1-206ENST00000539320 DYNC1H1Q14204 4646 aaKnown RBP15.63■□□□□ 0.09
SCARB1-206ENST00000539320 F5H768 121 aa15.63■□□□□ 0.09
SCARB1-206ENST00000539320 RTL8CO15255 209 aa15.63■□□□□ 0.09
SCARB1-206ENST00000539320 MPDU1O75352 247 aa15.63■□□□□ 0.09
SCARB1-206ENST00000539320 ODF3Q96PU9 254 aa15.63■□□□□ 0.09
SCARB1-206ENST00000539320 PKHD1P08F94 4074 aa15.63■□□□□ 0.09
SCARB1-206ENST00000539320 A0A1B0GVY2 172 aa15.62■□□□□ 0.09
SCARB1-206ENST00000539320 NPIPB6E9PJ23 425 aa15.62■□□□□ 0.09
SCARB1-206ENST00000539320 LEPP41159 167 aa15.62■□□□□ 0.09
SCARB1-206ENST00000539320 Q6ZR54 194 aa15.62■□□□□ 0.09
SCARB1-206ENST00000539320 MRPL53Q96EL3 112 aaKnown RBP15.62■□□□□ 0.09
SCARB1-206ENST00000539320 NPCDR1Q9BY65 106 aa15.62■□□□□ 0.09
SCARB1-206ENST00000539320 NOP10Q9NPE3 64 aaKnown RBP15.62■□□□□ 0.09
SCARB1-206ENST00000539320 TMEM14CQ9P0S9 112 aa15.62■□□□□ 0.09
SCARB1-206ENST00000539320 CBY3A6NI87 242 aa15.61■□□□□ 0.09
SCARB1-206ENST00000539320 PRSS29PA6NIE9 313 aa15.61■□□□□ 0.09
SCARB1-206ENST00000539320 KIAA1109Q2LD37 5005 aa15.61■□□□□ 0.09
SCARB1-206ENST00000539320 TRBV19A0A075B6N1 114 aa15.6■□□□□ 0.09
SCARB1-206ENST00000539320 J3KRW8 73 aa15.6■□□□□ 0.09
SCARB1-206ENST00000539320 SIX6O95475 246 aa15.6■□□□□ 0.09
SCARB1-206ENST00000539320 FAM3BP58499 235 aaPredicted RBP15.6■□□□□ 0.09
SCARB1-206ENST00000539320 CCDC28AQ8IWP9 274 aa15.6■□□□□ 0.09
SCARB1-206ENST00000539320 ATG101Q9BSB4 218 aa15.6■□□□□ 0.09
SCARB1-206ENST00000539320 E5RGE8 158 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 M0R3E3 92 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 RLN2P04090 185 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 CT45A10P0DMU9 189 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 HIST1H1EP10412 219 aaKnown RBP15.59■□□□□ 0.09
SCARB1-206ENST00000539320 DEFA1P59665 94 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 DEFA3P59666 94 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 PDE6HQ13956 83 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 GCSAMLQ5JQS6 135 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 OR5C1Q8NGR4 320 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 THAP6Q8TBB0 222 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 NMES1Q9C002 83 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 SLC25A31Q9H0C2 315 aa15.59■□□□□ 0.09
SCARB1-206ENST00000539320 PRAF2O60831 178 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 NUDT3O95989 172 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 PYYP10082 97 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 NHLH2Q02577 135 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 LRRC37A5PQ49AS3 106 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 OR5AC2Q9NZP5 309 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 PRELID1Q9Y255 219 aa15.58■□□□□ 0.08
SCARB1-206ENST00000539320 NDUFB4O95168 129 aa15.57■□□□□ 0.08
SCARB1-206ENST00000539320 SOHLH1Q5JUK2 328 aa15.57■□□□□ 0.08
SCARB1-206ENST00000539320 TIMM9Q9Y5J7 89 aa15.57■□□□□ 0.08
SCARB1-206ENST00000539320 TRAV12-3A0A0B4J271 114 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 INMT-MINDY4F8WBC2 141 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 CLINT1Q14677 625 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 LINC00612Q8N6U2 182 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 RNF141Q8WVD5 230 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 SLC25A2Q9BXI2 301 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 KCNIP2Q9NS61 270 aa15.56■□□□□ 0.08
SCARB1-206ENST00000539320 SNURFLB1AK76 121 aa15.55■□□□□ 0.08
SCARB1-206ENST00000539320 H0YIZ8 118 aa15.55■□□□□ 0.08
SCARB1-206ENST00000539320 CYCSP99999 105 aaKnown RBP15.55■□□□□ 0.08
SCARB1-206ENST00000539320 BLNKQ8WV28 456 aa15.55■□□□□ 0.08
SCARB1-206ENST00000539320 PYGO2Q9BRQ0 406 aa15.55■□□□□ 0.08
SCARB1-206ENST00000539320 SLC25A5P05141 298 aaKnown RBP15.54■□□□□ 0.08
SCARB1-206ENST00000539320 ERCC8Q13216 396 aa15.54■□□□□ 0.08
SCARB1-206ENST00000539320 MIR17HGQ75NE6 70 aa15.54■□□□□ 0.08
SCARB1-206ENST00000539320 FAM167A-AS1Q96KT0 104 aa15.54■□□□□ 0.08
SCARB1-206ENST00000539320 AAMDCQ9H7C9 122 aa15.54■□□□□ 0.08
SCARB1-206ENST00000539320 C7orf71A4D174 169 aa15.53■□□□□ 0.08
SCARB1-206ENST00000539320 RGS21Q2M5E4 152 aa15.53■□□□□ 0.08
SCARB1-206ENST00000539320 C1orf134Q5TEV5 83 aa15.53■□□□□ 0.08
SCARB1-206ENST00000539320 EXOC3-AS1Q8N2X6 119 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms