RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 TRAV25A0A0B4J276 109 aa11.66□□□□□ -0.54
VAMP1-207ENST00000539047 ZNF727A8MUV8 499 aa11.66□□□□□ -0.54
VAMP1-207ENST00000539047 UBE2G1P62253 170 aa11.66□□□□□ -0.54
VAMP1-207ENST00000539047 SNRPD3P62318 126 aaKnown RBP11.66□□□□□ -0.54
VAMP1-207ENST00000539047 NIPSNAP3BQ9BS92 247 aa11.66□□□□□ -0.54
VAMP1-207ENST00000539047 TRAV2A0A0B4J234 112 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 C9JQL5 133 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 TCRAP04437 139 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 GBGT1Q8N5D6 347 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 LINC00482Q8N8I6 264 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
VAMP1-207ENST00000539047 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 PARLQ9H300 379 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 ANK2Q01484 3957 aa11.65□□□□□ -0.54
VAMP1-207ENST00000539047 OR4C46A6NHA9 309 aa11.64□□□□□ -0.55
VAMP1-207ENST00000539047 FBLL1A6NHQ2 334 aaKnown RBP11.64□□□□□ -0.55
VAMP1-207ENST00000539047 CD33P20138 364 aa11.64□□□□□ -0.55
VAMP1-207ENST00000539047 TFPI2P48307 235 aa11.64□□□□□ -0.55
VAMP1-207ENST00000539047 GNG5P63218 68 aa11.64□□□□□ -0.55
VAMP1-207ENST00000539047 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
VAMP1-207ENST00000539047 FMC1Q96HJ9 113 aa11.64□□□□□ -0.55
VAMP1-207ENST00000539047 TSPAN4O14817 238 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 PSG3Q16557 428 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 ADAMTSL5Q6ZMM2 481 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 LINC00052Q96N35 136 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 SPAG8Q99932 426 aaPredicted RBP11.63□□□□□ -0.55
VAMP1-207ENST00000539047 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
VAMP1-207ENST00000539047 DIRC3C9JPN6 131 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 APOC3P02656 99 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
VAMP1-207ENST00000539047 GNG4P50150 75 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 INSL3P51460 131 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 TAS2R60P59551 318 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-207ENST00000539047 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 SVBPQ8N300 66 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
VAMP1-207ENST00000539047 CARHSP1Q9Y2V2 147 aaKnown RBP11.62□□□□□ -0.55
VAMP1-207ENST00000539047 K7EQG2 157 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 M0R3E3 92 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 SOCS3O14543 225 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
VAMP1-207ENST00000539047 GUCA2BQ16661 112 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 TMEM183BQ1AE95 376 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 OR10J6PQ8NGY7 276 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 NDFIP1Q9BT67 221 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 GPR61Q9BZJ8 451 aa11.61□□□□□ -0.55
VAMP1-207ENST00000539047 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 C9JCJ5 164 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 M0R036 132 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 SNAPINO95295 136 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 HLA-DMBP28068 263 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 DERL1Q9BUN8 251 aa11.6□□□□□ -0.55
VAMP1-207ENST00000539047 IGLV1-51P01701 117 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-207ENST00000539047 FLI1Q01543 452 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-207ENST00000539047 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 C10orf91Q5T1B1 145 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 SMIM12Q96EX1 92 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 BIN3Q9NQY0 253 aa11.59□□□□□ -0.55
VAMP1-207ENST00000539047 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-207ENST00000539047 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-207ENST00000539047 ADIRFQ15847 76 aa11.58□□□□□ -0.56
VAMP1-207ENST00000539047 EBLN2Q6P2I7 272 aa11.58□□□□□ -0.56
VAMP1-207ENST00000539047 Q86TA4 180 aa11.58□□□□□ -0.56
VAMP1-207ENST00000539047 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
VAMP1-207ENST00000539047 LY96Q9Y6Y9 160 aa11.58□□□□□ -0.56
VAMP1-207ENST00000539047 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
VAMP1-207ENST00000539047 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 TRBV6-1A0A0K0K1D8 114 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 ZNF705FA8MVS1 300 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-207ENST00000539047 PRNTQ86SH4 94 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 BAGE2Q86Y30 109 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
VAMP1-207ENST00000539047 CT45A10P0DMU9 189 aa11.56□□□□□ -0.56
VAMP1-207ENST00000539047 MGST1P10620 155 aaKnown RBP11.56□□□□□ -0.56
VAMP1-207ENST00000539047 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
VAMP1-207ENST00000539047 C20orf173Q96LM9 149 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms