RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 H2BFSP57053 126 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 PDE6HQ13956 83 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 LRRC37A5PQ49AS3 106 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 ZNF767PQ75MW2 155 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 RPP25LQ8N5L8 163 aaKnown RBP8.25□□□□□ -1.09
RTN3-209ENST00000538995 OR10J6PQ8NGY7 276 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 PPP1R1CQ8WVI7 109 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 MRPL53Q96EL3 112 aaKnown RBP8.25□□□□□ -1.09
RTN3-209ENST00000538995 NDUFAF3Q9BU61 184 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 OR5AC2Q9NZP5 309 aa8.25□□□□□ -1.09
RTN3-209ENST00000538995 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
RTN3-209ENST00000538995 SSNA1O43805 119 aa8.24□□□□□ -1.09
RTN3-209ENST00000538995 TAS2R60P59551 318 aa8.24□□□□□ -1.09
RTN3-209ENST00000538995 NHLH2Q02577 135 aa8.24□□□□□ -1.09
RTN3-209ENST00000538995 ODF3Q96PU9 254 aa8.24□□□□□ -1.09
RTN3-209ENST00000538995 C20orf144Q9BQM9 153 aa8.24□□□□□ -1.09
RTN3-209ENST00000538995 TRBV19A0A075B6N1 114 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 TRAV12-2A0A075B6T6 113 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 TRAV5A0A0B4J249 113 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 H3BTX0 84 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 SNRPCP09234 159 aaKnown RBP8.23□□□□□ -1.09
RTN3-209ENST00000538995 HIST1H1EP10412 219 aaKnown RBP8.23□□□□□ -1.09
RTN3-209ENST00000538995 DAD1P61803 113 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 CLINT1Q14677 625 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 THAP6Q8TBB0 222 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 WDR61Q9GZS3 305 aaKnown RBP8.23□□□□□ -1.09
RTN3-209ENST00000538995 ZNF586Q9NXT0 402 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 PRELID1Q9Y255 219 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
RTN3-209ENST00000538995 ZNF705GA8MUZ8 300 aaPredicted RBP8.22□□□□□ -1.09
RTN3-209ENST00000538995 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 C17orf112F2Z3M2 114 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 H7BYZ3 331 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 MPC2O95563 127 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 P0DMU3 169 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 FAM231AP0DMU4 169 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 FAM231CP0DMU5 169 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 ZNF493Q6ZR52 646 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 LINC01587Q99440 93 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 ATP5SQ99766 215 aa8.22□□□□□ -1.09
RTN3-209ENST00000538995 MRPL32Q9BYC8 188 aaKnown RBP8.22□□□□□ -1.09
RTN3-209ENST00000538995 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.09
RTN3-209ENST00000538995 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 PRAC2D3DTV9 90 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 PTTG1O95997 202 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 LEPP41159 167 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 GCSAMLQ5JQS6 135 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 SLC25A2Q9BXI2 301 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 HSPB11Q9Y547 144 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 TIMM9Q9Y5J7 89 aa8.21□□□□□ -1.1
RTN3-209ENST00000538995 NDUFB4O95168 129 aa8.2□□□□□ -1.1
RTN3-209ENST00000538995 PYYP10082 97 aa8.2□□□□□ -1.1
RTN3-209ENST00000538995 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
RTN3-209ENST00000538995 RNASE8Q8TDE3 154 aaKnown RBP8.2□□□□□ -1.1
RTN3-209ENST00000538995 TMEM263Q8WUH6 116 aaKnown RBP8.2□□□□□ -1.1
RTN3-209ENST00000538995 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
RTN3-209ENST00000538995 PARD6GQ9BYG4 376 aaPredicted RBP8.2□□□□□ -1.1
RTN3-209ENST00000538995 AAMDCQ9H7C9 122 aa8.2□□□□□ -1.1
RTN3-209ENST00000538995 IFNA5P01569 189 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 CT45A10P0DMU9 189 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 AZU1P20160 251 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 RPL12P30050 165 aaKnown RBP8.19□□□□□ -1.1
RTN3-209ENST00000538995 MIR17HGQ75NE6 70 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 MBD2Q9UBB5 411 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 FUT9Q9Y231 359 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 TIMM8BQ9Y5J9 83 aaPredicted RBP8.19□□□□□ -1.1
RTN3-209ENST00000538995 HECTD4Q9Y4D8 3996 aa8.19□□□□□ -1.1
RTN3-209ENST00000538995 M0R3E3 92 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 PRM2P04554 102 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 SLC25A5P05141 298 aaKnown RBP8.18□□□□□ -1.1
RTN3-209ENST00000538995 NBEAP1P0C6P0 100 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 PRB4P10163 310 aaPredicted RBP8.18□□□□□ -1.1
RTN3-209ENST00000538995 HTN3P15516 51 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 CCDC28AQ8IWP9 274 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 SCGB1C1Q8TD33 95 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 BLNKQ8WV28 456 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 LINC00477Q96M19 166 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 PAXXQ9BUH6 204 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 OR51M1Q9H341 326 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 ALG5Q9Y673 324 aa8.18□□□□□ -1.1
RTN3-209ENST00000538995 CBY3A6NI87 242 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 NMBP08949 121 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 DEFB130BP0DP73 79 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 DEFB130AP0DP74 79 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 HTN1P15515 57 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 TAS2R45P59539 299 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 C9orf47Q6ZRZ4 202 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 FXYD5Q96DB9 178 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 FAM19A4Q96LR4 140 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 PYGO2Q9BRQ0 406 aa8.17□□□□□ -1.1
RTN3-209ENST00000538995 C7orf71A4D174 169 aa8.16□□□□□ -1.1
RTN3-209ENST00000538995 KLLNB2CW77 178 aa8.16□□□□□ -1.1
RTN3-209ENST00000538995 OR7C2O60412 319 aa8.16□□□□□ -1.1
RTN3-209ENST00000538995 ATP5G1P05496 136 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms