RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CARHSP1Q9Y2V2 147 aaKnown RBP4.27□□□□□ -1.73
LRP6-203ENST00000538239 A0A087WWC5 75 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 AMBPP02760 352 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
LRP6-203ENST00000538239 C9orf66Q5T8R8 295 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 LYPD1Q8N2G4 141 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 KIAA1549LQ6ZVL6 1849 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 DPM2O94777 84 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 HOXD3P31249 432 aaPredicted RBP4.26□□□□□ -1.73
LRP6-203ENST00000538239 YPEL3P61236 119 aaPredicted RBP4.26□□□□□ -1.73
LRP6-203ENST00000538239 SS18Q15532 418 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 TEX43Q6ZNM6 134 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 HAPLN4Q86UW8 402 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 LINC00479Q96M42 142 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 SLC25A2Q9BXI2 301 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 LIME1Q9H400 295 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 IGHV7-4-1A0A0J9YVY3 117 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
LRP6-203ENST00000538239 SPRY4Q9C004 299 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 TMEM131Q92545 1883 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 Q86TA4 180 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 TTC9CQ8N5M4 171 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 CYTL1Q9NRR1 136 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 IGKCP01834 107 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 LURAP1LQ8IV03 231 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 C11orf53Q8IXP5 236 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 IGF2BP2-AS1Q96M15 143 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 NCOR1P1Q9H4R4 102 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 MRPL27Q9P0M9 148 aaKnown RBP4.26□□□□□ -1.73
LRP6-203ENST00000538239 TECTAO75443 2155 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 EREGO14944 169 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 ARMS2P0C7Q2 107 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 CST9LQ9H4G1 147 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 IGHV3-38A0A0C4DH36 116 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 IGLV2-23P01705 113 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 APRG1Q8IVJ8 170 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 MS4A6AQ9H2W1 248 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 CACNA1DQ01668 2161 aa4.26□□□□□ -1.73
LRP6-203ENST00000538239 A0A0J9YY99 117 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 VCYO14598 125 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 BLCAPP62952 87 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 NCKAP5O14513 1909 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 A0A1B0GV72 72 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 WT1-ASQ06250 92 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 TMEM86BQ8N661 226 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 C6orf226Q5I0X4 101 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 BCL6BQ8N143 479 aaPredicted RBP4.25□□□□□ -1.73
LRP6-203ENST00000538239 GNB1LQ9BYB4 327 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 IGHV1OR15-1A0A075B7D0 117 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 ZNF815PA8K554 130 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 FNDC10F2Z333 226 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 LGALS1P09382 135 aaKnown RBP4.25□□□□□ -1.73
LRP6-203ENST00000538239 ATP5L2Q7Z4Y8 100 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 CEP250Q9BV73 2442 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 GPR179Q6PRD1 2367 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 GP9P14770 177 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 ZFP36P26651 326 aaKnown RBP4.25□□□□□ -1.73
LRP6-203ENST00000538239 CDKN1BP46527 198 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 TMEM158Q8WZ71 300 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 RITA1Q96K30 269 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 CEP192Q8TEP8 1941 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 LHBP01229 141 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 TMEM75Q8N9X5 138 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 ZGRF1Q86YA3 2104 aa4.25□□□□□ -1.73
LRP6-203ENST00000538239 GVINP1Q7Z2Y8 2422 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 H3BRN7 92 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 PDE6HQ13956 83 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 RIF1Q5UIP0 2472 aaKnown RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 CTAG1AP78358 180 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 GAGE6Q13070 117 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 ANXA2RQ3ZCQ2 193 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 AMN1Q8IY45 258 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 OR11H6Q8NGC7 330 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 TMEM170AQ8WVE7 144 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 USF3Q68DE3 2245 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 PAX4O43316 350 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 PLP1P60201 277 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 FOXE3Q13461 319 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 ATRAIDQ6UW56 229 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 CLPSL2Q6UWE3 100 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 JPT2Q9H910 190 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 TRBV25-1A0A075B6N4 114 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 IGKV1-39P01597 117 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 IGKV1D-39P04432 117 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 CGB7P0DN87 165 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 FAM90A2PQ658T7 463 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 A0A1B0GUS0 222 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 F6UB75 175 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 H3BUA1 57 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 ZNF561-AS1K7EIQ3 104 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 ZNRF2Q8NHG8 242 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 RASL10AQ92737 203 aa4.24□□□□□ -1.73
LRP6-203ENST00000538239 C1orf147Q96MC9 270 aaPredicted RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 FGF23Q9GZV9 251 aaPredicted RBP4.24□□□□□ -1.73
LRP6-203ENST00000538239 TRBV19A0A075B6N1 114 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms