RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
CLIP1-210ENST00000538120 CACNA1BQ00975 2339 aa8.43□□□□□ -1.06
CLIP1-210ENST00000538120 IGLV11-55A0A075B6I3 123 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 IGHV7-81A0A0B4J1V7 117 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 SH2D7A6NKC9 451 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-210ENST00000538120 NPIPB5A8MRT5 1133 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 M0QZ24 198 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 PSG1P11464 419 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 ATP5J2P56134 94 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 IGHV4-30-2A0A087WSY4 118 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 HSBP1O75506 76 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 FAM106CPP0CH98 169 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 COX19Q49B96 90 aa8.42□□□□□ -1.06
CLIP1-210ENST00000538120 RNASEKQ6P5S7 137 aaKnown RBP8.42□□□□□ -1.06
CLIP1-210ENST00000538120 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
CLIP1-210ENST00000538120 M0R2Z0 102 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 IGLL1P15814 213 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 MYCNOSP40205 109 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 LEMD1Q68G75 181 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 ZNF329Q86UD4 541 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 NRGNQ92686 78 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 CSMD1Q96PZ7 3565 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 C20orf202A1L168 122 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 C2orf70A6NJV1 201 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 HIGD1CA8MV81 97 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 URB1-AS1Q96HZ7 61 aa8.41□□□□□ -1.06
CLIP1-210ENST00000538120 MRPL27Q9P0M9 148 aaKnown RBP8.41□□□□□ -1.06
CLIP1-210ENST00000538120 A0A1B0GV72 72 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
CLIP1-210ENST00000538120 F8W735 103 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-210ENST00000538120 PEX7O00628 323 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 GP9P14770 177 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 PTTG1IPP53801 180 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 KHDC1LQ5JSQ8 128 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-210ENST00000538120 KLHDC1Q8N7A1 406 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 RASL11BQ9BPW5 248 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 S4R3C0 116 aa8.4□□□□□ -1.06
CLIP1-210ENST00000538120 IGHV3OR16-10A0A075B7F0 116 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 A0A1W2PRX2 142 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 HLA-DRB1P01911 266 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 FOXA3P55318 350 aaPredicted RBP8.4□□□□□ -1.07
CLIP1-210ENST00000538120 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 TCF24Q7RTU0 167 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 OR4F17Q8NGA8 305 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 WIPF2Q8TF74 440 aaPredicted RBP8.4□□□□□ -1.07
CLIP1-210ENST00000538120 SMIM12Q96EX1 92 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 ABCA2Q9BZC7 2435 aa8.4□□□□□ -1.07
CLIP1-210ENST00000538120 A0A1B0GW15 77 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 LYZP61626 148 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 BLNKQ8WV28 456 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 GRAMD2BQ96HH9 432 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 C7orf69Q9H7B7 122 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 HIGD1AQ9Y241 93 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 WNK2Q9Y3S1 2297 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 ZFYVE26Q68DK2 2539 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 TRAV9-2A0A087WT02 112 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 IGHV1-69DA0A0B4J2H0 117 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 A8MZ25 164 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 H3BTX0 84 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 IGHV1-69P01742 117 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 UBE2G1P62253 170 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 PIFOQ8TCI5 191 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
CLIP1-210ENST00000538120 SLC25A39Q9BZJ4 359 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-210ENST00000538120 TOMM40O96008 361 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 KLF5Q13887 457 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-210ENST00000538120 ZNF491Q8N8L2 437 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 MRPS16Q9Y3D3 137 aaKnown RBP8.38□□□□□ -1.07
CLIP1-210ENST00000538120 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 UTP20O75691 2785 aaKnown RBP8.38□□□□□ -1.07
CLIP1-210ENST00000538120 WI2-2373I1.2A0A1W2PRP0 233 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 PSG3Q16557 428 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-210ENST00000538120 MCRIP2Q9BUT9 160 aaKnown RBP8.38□□□□□ -1.07
CLIP1-210ENST00000538120 ABCA1O95477 2261 aa8.38□□□□□ -1.07
CLIP1-210ENST00000538120 ZNF462Q96JM2 2506 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 OR2J3O76001 311 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 PRB4P10163 310 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-210ENST00000538120 KLK9Q2XQG4 91 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 RASL11AQ6T310 242 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 BRD3OSQ6XYD6 125 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 BCL6BQ8N143 479 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-210ENST00000538120 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 KLK9Q9UKQ9 250 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 SOX21Q9Y651 276 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-210ENST00000538120 A0A1B0GXF2 115 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 ATP6V0E1O15342 81 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 IGHV3-23P01764 117 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 IGHV4-38-2P0DP08 117 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 C21orf62Q9NYP8 219 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 EPDR1Q9UM22 224 aa8.37□□□□□ -1.07
CLIP1-210ENST00000538120 TRAV40A0A0B4J280 105 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms