RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 ZNF414Q96IQ9 312 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 SPRY2O43597 315 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 RAB4AP20338 218 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 C1orf194Q5T5A4 169 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 SIGLEC15Q6ZMC9 328 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 Q8N9W7 124 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 PRSS3P2Q8NHM4 247 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 MBD6Q96DN6 1003 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 ALKBH7Q9BT30 221 aaPredicted RBP6.81□□□□□ -1.32
UBE3B-208ENST00000538070 MTORP42345 2549 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 IGLV11-55A0A075B6I3 123 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.81□□□□□ -1.32
UBE3B-208ENST00000538070 IGHV2-70DA0A0C4DH43 119 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 TMEM189A5PLL7 270 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 M0R143 59 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 IGHV4-39P01824 125 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 SRD5A1P18405 259 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 DEFB1P60022 68 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 CCL19Q99731 98 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 RNF5Q99942 180 aa6.81□□□□□ -1.32
UBE3B-208ENST00000538070 IGHV4-61A0A0C4DH41 118 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 ODF3BA8MYP8 253 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 NPFFO15130 113 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 SNAI2O43623 268 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 NCR2O95944 276 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 CTSGP08311 255 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 DMRTA1Q5VZB9 504 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 WFDC12Q8WWY7 111 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 A0A1B0GUT8 65 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 APOHP02749 345 aaPredicted RBP6.8□□□□□ -1.32
UBE3B-208ENST00000538070 TWIST1Q15672 202 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 PSG3Q16557 428 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 OR10J3Q5JRS4 329 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 CLEC2AQ6UVW9 174 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 FAM231DQ6ZW35 169 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 ERASQ7Z444 233 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 ACANP16112 2415 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 C2CD3Q4AC94 2353 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 PRAC2D3DTV9 90 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 SCGB2A1O75556 95 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 NDUFA3O95167 84 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 RPL7P18124 248 aaKnown RBP6.8□□□□□ -1.32
UBE3B-208ENST00000538070 ZNF124Q15973 351 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 COX19Q49B96 90 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 LYZL1Q6UWQ5 148 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 NPBQ8NG41 125 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 MLST8Q9BVC4 326 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 C7orf69Q9H7B7 122 aa6.8□□□□□ -1.32
UBE3B-208ENST00000538070 TRAV30A0A087WSZ9 112 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 TRGV3P03979 118 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 PF4V1P10720 104 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 LMO4P61968 165 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 EBLN2Q6P2I7 272 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 DTX2Q86UW9 622 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 OR8A1Q8NGG7 326 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 GLMPQ8WWB7 406 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 SIRPDQ9H106 197 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 TCAPO15273 167 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 GOSR1O95249 250 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 IGLV2-11P01706 119 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 IGHV4-38-2P0DP08 117 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
UBE3B-208ENST00000538070 DEFB104AQ8WTQ1 72 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 KLF12Q9Y4X4 402 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 CENPVL3A0A0U1RRI6 287 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 FAM181BA6NEQ2 426 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 SH2D1AO60880 128 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 IGLC2P0DOY2 106 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 CRIP1P50238 77 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 UBE2E1P51965 193 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
UBE3B-208ENST00000538070 PLP1P60201 277 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 FA2HQ7L5A8 372 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 AMN1Q8IY45 258 aa6.79□□□□□ -1.32
UBE3B-208ENST00000538070 EGR2P11161 476 aaPredicted RBP6.78□□□□□ -1.32
UBE3B-208ENST00000538070 ZNF25P17030 456 aaPredicted RBP6.78□□□□□ -1.32
UBE3B-208ENST00000538070 RIGQ13278 110 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 COTL1Q14019 142 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 hDV102S1A0JD36 115 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 F8W735 103 aaPredicted RBP6.78□□□□□ -1.32
UBE3B-208ENST00000538070 H3BUX3 64 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 S100A7AQ86SG5 101 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 C19orf71A6NCJ1 209 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 Q6ZVH6 145 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 TTC9CQ8N5M4 171 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 TMEM14CQ9P0S9 112 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
UBE3B-208ENST00000538070 LINC00614P0C842 121 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 TMEM95Q3KNT9 176 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 RNF24Q9Y225 148 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 UFC1Q9Y3C8 167 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 USP24Q9UPU5 2620 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 IGHV4-30-2A0A087WSY4 118 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 D6R8Y8 96 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 TRBV12-3P01733 135 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms