RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 C8orf49Q96NF6 230 aa9.55□□□□□ -0.88
CPSF7-218ENST00000537641 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
CPSF7-218ENST00000537641 PTPRQQ9UMZ3 2332 aa9.55□□□□□ -0.88
CPSF7-218ENST00000537641 CD3EP07766 207 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 UCNP55089 124 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 FOXE3Q13461 319 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 AMN1Q8IY45 258 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 DMXL2Q8TDJ6 3036 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
CPSF7-218ENST00000537641 LOC389332A0A1B0GUA5 103 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 TMEM213A2RRL7 107 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 B9A039 149 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 LY6LH3BQJ8 138 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 FAM106CPP0CH98 169 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-218ENST00000537641 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 FAM106AQ4KMX7 169 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 FER1L6-AS1Q8NA97 138 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 POLEQ07864 2286 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 ROS1P08922 2347 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 LINC01546A6NGU7 62 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 M0R3E3 92 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 CNIH1O95406 144 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 UQCRFS1P47985 274 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 FBXL19-AS1Q494R0 122 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 ADAMTSL5Q6ZMM2 481 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 OR5A1Q8NGJ0 315 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 JMJD8Q96S16 334 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
CPSF7-218ENST00000537641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-218ENST00000537641 SNAI2O43623 268 aa9.52□□□□□ -0.89
CPSF7-218ENST00000537641 BMI1P35226 326 aa9.52□□□□□ -0.89
CPSF7-218ENST00000537641 ASCL2Q99929 193 aa9.52□□□□□ -0.89
CPSF7-218ENST00000537641 THYN1Q9P016 225 aa9.52□□□□□ -0.89
CPSF7-218ENST00000537641 TLN1Q9Y490 2541 aaKnown RBP9.52□□□□□ -0.89
CPSF7-218ENST00000537641 PLXNB1O43157 2135 aa9.52□□□□□ -0.89
CPSF7-218ENST00000537641 PKDREJQ9NTG1 2253 aa9.52□□□□□ -0.89
CPSF7-218ENST00000537641 PPIAL4CA0A0B4J2A2 164 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 NPIPB5A8MRT5 1133 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 NBR2O15453 112 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 GNG7O60262 68 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 NDUFA3O95167 84 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 IGLC6P0CF74 106 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 PPIAL4GP0DN37 164 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 RPL7P18124 248 aaKnown RBP9.51□□□□□ -0.89
CPSF7-218ENST00000537641 COX7A1P24310 79 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 MFAP4P55083 255 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 NPBQ8NG41 125 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 IGFBPL1Q8WX77 278 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 HIGD1BQ9P298 99 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 MALRD1Q5VYJ5 2156 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 TMSB15BA0A087X1C1 80 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 A0A0G2JLM5 398 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 NPYP01303 97 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 CKS2P33552 79 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 OR2K2Q8NGT1 345 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 PRR25Q96S07 402 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 MEGF9Q9H1U4 602 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
CPSF7-218ENST00000537641 IGLV11-55A0A075B6I3 123 aa9.5□□□□□ -0.89
CPSF7-218ENST00000537641 H3BUT2 72 aa9.5□□□□□ -0.89
CPSF7-218ENST00000537641 NDUFS7O75251 213 aa9.5□□□□□ -0.89
CPSF7-218ENST00000537641 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
CPSF7-218ENST00000537641 S100A7P31151 101 aa9.5□□□□□ -0.89
CPSF7-218ENST00000537641 CNFNQ9BYD5 112 aa9.5□□□□□ -0.89
CPSF7-218ENST00000537641 A0A1W2PPM0 123 aa9.49□□□□□ -0.89
CPSF7-218ENST00000537641 FAM90A27PA6NNH2 459 aa9.49□□□□□ -0.89
CPSF7-218ENST00000537641 TIMM23O14925 209 aa9.49□□□□□ -0.89
CPSF7-218ENST00000537641 DLX1P56177 255 aa9.49□□□□□ -0.89
CPSF7-218ENST00000537641 KLRB1Q12918 225 aa9.49□□□□□ -0.89
CPSF7-218ENST00000537641 CFHR4Q92496 578 aa9.49□□□□□ -0.89
CPSF7-218ENST00000537641 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-218ENST00000537641 G3V4G9 280 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-218ENST00000537641 SMIM17P0DL12 118 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 EGR2P11161 476 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-218ENST00000537641 HLA-DRB4P13762 266 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 TWIST1Q15672 202 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 NEGR1Q7Z3B1 354 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 ZMAT4Q9H898 229 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 RAXQ9Y2V3 346 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 HILPDAQ9Y5L2 63 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 HLA-DRB4X5D2U9 266 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 DCHS1Q96JQ0 3298 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 CCL21O00585 134 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 SAP30O75446 220 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 FCER1GP30273 86 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 NMUP48645 174 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 OR11H6Q8NGC7 330 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
CPSF7-218ENST00000537641 DPM3Q9P2X0 92 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 SPCS1Q9Y6A9 102 aa9.48□□□□□ -0.89
CPSF7-218ENST00000537641 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-218ENST00000537641 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms