RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 M0R3E3 92 aa12.43□□□□□ -0.42
GPN3-202ENST00000537466 AMBPP02760 352 aa12.43□□□□□ -0.42
GPN3-202ENST00000537466 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
GPN3-202ENST00000537466 PPP1R14DQ9NXH3 145 aa12.43□□□□□ -0.42
GPN3-202ENST00000537466 TIMM9Q9Y5J7 89 aa12.43□□□□□ -0.42
GPN3-202ENST00000537466 G3V3Q6 166 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
GPN3-202ENST00000537466 INSP01308 110 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 PRM2P04554 102 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 OR10J4P0C629 311 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 PDE6HQ13956 83 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 ZNF767PQ75MW2 155 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 EXOC3-AS1Q8N2X6 119 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 OR2T35Q8NGX2 323 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 OR10J6PQ8NGY7 276 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 FXYD5Q96DB9 178 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 PAXXQ9BUH6 204 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 DNAH1Q9P2D7 4330 aa12.42□□□□□ -0.42
GPN3-202ENST00000537466 RNF222A6NCQ9 220 aa12.41□□□□□ -0.42
GPN3-202ENST00000537466 EMP1P54849 157 aa12.41□□□□□ -0.42
GPN3-202ENST00000537466 Q6ZTC4 211 aa12.41□□□□□ -0.42
GPN3-202ENST00000537466 TMEM208Q9BTX3 173 aa12.41□□□□□ -0.42
GPN3-202ENST00000537466 KLK5Q9Y337 293 aaPredicted RBP12.41□□□□□ -0.42
GPN3-202ENST00000537466 FXYD6-FXYD2A0A087WZ82 144 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 OR7C2O60412 319 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 JTBO76095 146 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 HBE1P02100 147 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 KIR3DS1Q14943 382 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 C12orf74Q32Q52 190 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
GPN3-202ENST00000537466 RNF141Q8WVD5 230 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 MRPL53Q96EL3 112 aaKnown RBP12.4□□□□□ -0.42
GPN3-202ENST00000537466 TNFSF18Q9UNG2 199 aa12.4□□□□□ -0.42
GPN3-202ENST00000537466 LOC102723971A0A1B0GUV8 181 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 NPIPB6E9PJ23 425 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 CDKN1BP46527 198 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 RAB2AP61019 212 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 ZNF266Q14584 549 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 ICAM4Q14773 271 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 RRN3P1Q2M238 152 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 HSD17B11Q8NBQ5 300 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.43
GPN3-202ENST00000537466 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
GPN3-202ENST00000537466 ZNF705GA8MUZ8 300 aaPredicted RBP12.39□□□□□ -0.43
GPN3-202ENST00000537466 CT45A10P0DMU9 189 aa12.39□□□□□ -0.43
GPN3-202ENST00000537466 M6PRP20645 277 aa12.39□□□□□ -0.43
GPN3-202ENST00000537466 ACOT6Q3I5F7 207 aaPredicted RBP12.39□□□□□ -0.43
GPN3-202ENST00000537466 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
GPN3-202ENST00000537466 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
GPN3-202ENST00000537466 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
GPN3-202ENST00000537466 ATP6V0CP27449 155 aa12.38□□□□□ -0.43
GPN3-202ENST00000537466 ERCC8Q13216 396 aa12.38□□□□□ -0.43
GPN3-202ENST00000537466 KHDC3LQ587J8 217 aa12.38□□□□□ -0.43
GPN3-202ENST00000537466 FAM122CQ6P4D5 195 aa12.38□□□□□ -0.43
GPN3-202ENST00000537466 C11orf94C9JXX5 98 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 SMLR1H3BR10 107 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 SPART-AS1P0CW21 52 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 TAS2R45P59539 299 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
GPN3-202ENST00000537466 FAM222AQ5U5X8 452 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 C2CD4CQ8TF44 421 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 DKK2Q9UBU2 259 aa12.37□□□□□ -0.43
GPN3-202ENST00000537466 YTHDF2Q9Y5A9 579 aaKnown RBP12.37□□□□□ -0.43
GPN3-202ENST00000537466 J3KRW8 73 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 AZU1P20160 251 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
GPN3-202ENST00000537466 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 OR2G3Q8NGZ4 309 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 LINC01587Q99440 93 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 PSMG3Q9BT73 122 aaPredicted RBP12.36□□□□□ -0.43
GPN3-202ENST00000537466 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
GPN3-202ENST00000537466 IGKV2-40A0A087WW87 121 aaPredicted RBP12.35□□□□□ -0.43
GPN3-202ENST00000537466 TRAV10A0A0B4J240 114 aa12.35□□□□□ -0.43
GPN3-202ENST00000537466 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
GPN3-202ENST00000537466 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
GPN3-202ENST00000537466 IGKV2D-40P01614 121 aaPredicted RBP12.35□□□□□ -0.43
GPN3-202ENST00000537466 TSPOP30536 169 aa12.35□□□□□ -0.43
GPN3-202ENST00000537466 RANP62826 216 aaKnown RBP12.35□□□□□ -0.43
GPN3-202ENST00000537466 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
GPN3-202ENST00000537466 ODF3Q96PU9 254 aa12.35□□□□□ -0.43
GPN3-202ENST00000537466 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
GPN3-202ENST00000537466 IGLL5B9A064 214 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 Q9H3A6 140 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 ARPC5O15511 151 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 LY6G6CO95867 125 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 HTN1P15515 57 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 LEPP41159 167 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 TAS2R60P59551 318 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 C9orf47Q6ZRZ4 202 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 FAM19A4Q96LR4 140 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 VGLL1Q99990 258 aa12.34□□□□□ -0.43
GPN3-202ENST00000537466 DEFB131BA0A096LNP1 70 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms