RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 FLVCR2Q9UPI3 526 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 LPAP08519 4548 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 IGKV1D-13A0A0B4J2D9 117 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FAM223BA6NKX1 122 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FAM25EA8MYX2 175 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FCN1O00602 326 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 PHOX2AO14813 284 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 MED6O75586 246 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 OR5AC1P0C628 307 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 TRAPPC2P0DI81 140 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 TRAPPC2BP0DI82 140 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 PET100P0DJ07 73 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 SAA2P0DJI9 122 aaPredicted RBP4.2□□□□□ -1.74
CCDC60-203ENST00000536742 IGKV1-13P0DP09 117 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 NQO2P16083 231 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 NUP62P37198 522 aaPredicted RBP4.2□□□□□ -1.74
CCDC60-203ENST00000536742 LPAR6P43657 344 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 AKR1C2P52895 323 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FGL1Q08830 312 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 PPP1R1AQ13522 171 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 GNMTQ14749 295 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 VMA21Q3ZAQ7 101 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 ZNF833PQ6ZTB9 187 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 H2BFWTQ7Z2G1 175 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 PDPNQ86YL7 162 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FAM223AQ8IWN6 122 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 MITD1Q8WV92 249 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 RBPMSQ93062 196 aaKnown RBP4.2□□□□□ -1.74
CCDC60-203ENST00000536742 TSNAXQ99598 290 aaKnown RBP4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FXYD6Q9H0Q3 95 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 TMEM222Q9H0R3 208 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 FBXL15Q9H469 300 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 SLC35D1Q9NTN3 355 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 WASHC3Q9Y3C0 194 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 PUS1Q9Y606 427 aaKnown RBP eCLIP4.2□□□□□ -1.74
CCDC60-203ENST00000536742 ALG5Q9Y673 324 aa4.2□□□□□ -1.74
CCDC60-203ENST00000536742 TRAV3A0A0B4J244 114 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 C7orf66A4D0T2 115 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 WRBO00258 174 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 CCNKO75909 580 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 CDS2O95674 445 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 IGLV2-23P01705 113 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 SLC25A6P12236 298 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 PVALBP20472 110 aaPredicted RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 CDKN1BP46527 198 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 BCAP31P51572 246 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 HNRNPA3P51991 378 aaKnown RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 RRAS2P62070 204 aaPredicted RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 ATP5G2Q06055 141 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 EXOSC2Q13868 293 aaKnown RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 ACOT6Q3I5F7 207 aaPredicted RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 RPL39P5Q59GN2 51 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 AKAP14Q86UN6 197 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 ZNF439Q8NDP4 499 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 LSM10Q969L4 123 aaKnown RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 PPP1R14BQ96C90 147 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 TMEM56Q96MV1 263 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 SEC22CQ9BRL7 303 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 UPK3BQ9BT76 320 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 IFI27L2Q9H2X8 130 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 ENY2Q9NPA8 101 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.19□□□□□ -1.74
CCDC60-203ENST00000536742 COA4Q9NYJ1 87 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 TMEM56-RWDD3S4R434 201 aa4.19□□□□□ -1.74
CCDC60-203ENST00000536742 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 A0A0U1RRA0 63 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 MFSD2BA6NFX1 497 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 PPP5D1E7EU14 171 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 L7N2F9 121 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 GOSR2O14653 212 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 SLC31A2O15432 143 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 CYB5BO43169 146 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 CRYZL1O95825 349 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 KRASP01116 189 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 SULT1A3P0DMM9 295 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 SULT1A4P0DMN0 295 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 CT45A6P0DMU7 189 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 CT45A5P0DMU8 189 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 CT45A7P0DMV0 189 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 HLA-GP17693 338 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 DEFA5Q01523 94 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 FXYD3Q14802 87 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 SP6Q3SY56 376 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 C2orf66Q6UXQ4 117 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 SCXQ7RTU7 201 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 SELENOHQ8IZQ5 122 aaKnown RBP4.18□□□□□ -1.74
CCDC60-203ENST00000536742 DRAXINQ8NBI3 349 aaPredicted RBP4.18□□□□□ -1.74
CCDC60-203ENST00000536742 OR1S1Q8NH92 325 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 GRPEL2Q8TAA5 225 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 GLYATL2Q8WU03 294 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 C2orf50Q96LR7 162 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 CIB3Q96Q77 187 aaPredicted RBP4.18□□□□□ -1.74
CCDC60-203ENST00000536742 MRPL20Q9BYC9 149 aaKnown RBP4.18□□□□□ -1.74
CCDC60-203ENST00000536742 GSKIPQ9P0R6 139 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 PRNDQ9UKY0 176 aa4.18□□□□□ -1.74
CCDC60-203ENST00000536742 H0YJW9 148 aa4.17□□□□□ -1.74
CCDC60-203ENST00000536742 CA2P00918 260 aa4.17□□□□□ -1.74
CCDC60-203ENST00000536742 IGLV2-8P01709 118 aa4.17□□□□□ -1.74
CCDC60-203ENST00000536742 GIPP09681 153 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms