RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 NUP35Q8NFH5 326 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 GPR61Q9BZJ8 451 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 NAT8BQ9UHF3 227 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 ITPR3Q14573 2671 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 CHEK1O14757 476 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 TMEM136Q6ZRR5 245 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 WFDC11Q8NEX6 87 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 OR4X2Q8NGF9 303 aa17.43■□□□□ 0.38
HMGA2-206ENST00000536545 NBPF19A0A087WUL8 3843 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 IGHV3OR16-13A0A075B7E8 117 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 IGKV2-40A0A087WW87 121 aaPredicted RBP17.42■□□□□ 0.38
HMGA2-206ENST00000536545 IGHV3-49A0A0A0MS15 119 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 IGHV3-74A0A0B4J1X5 117 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 IGKV2D-40P01614 121 aaPredicted RBP17.42■□□□□ 0.38
HMGA2-206ENST00000536545 MT-ND6P03923 174 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 PSMB8P28062 276 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 HLA-DMBP28068 263 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 PDZD11Q5EBL8 140 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 MRPL54Q6P161 138 aaKnown RBP17.42■□□□□ 0.38
HMGA2-206ENST00000536545 UNQ9165/PRO28630Q6UXU0 137 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 C12orf57Q99622 126 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 SLC50A1Q9BRV3 221 aa17.42■□□□□ 0.38
HMGA2-206ENST00000536545 HIGD1CA8MV81 97 aa17.41■□□□□ 0.38
HMGA2-206ENST00000536545 IGFL4Q6B9Z1 124 aa17.41■□□□□ 0.38
HMGA2-206ENST00000536545 OR4B1Q8NGF8 309 aa17.41■□□□□ 0.38
HMGA2-206ENST00000536545 WIPF2Q8TF74 440 aaPredicted RBP17.41■□□□□ 0.38
HMGA2-206ENST00000536545 DAZAP1Q96EP5 407 aaKnown RBP17.41■□□□□ 0.38
HMGA2-206ENST00000536545 ASCL2Q99929 193 aa17.41■□□□□ 0.38
HMGA2-206ENST00000536545 RASL11AQ6T310 242 aa17.4■□□□□ 0.38
HMGA2-206ENST00000536545 MXRA5Q9NR99 2828 aa17.4■□□□□ 0.38
HMGA2-206ENST00000536545 TMEM89A2RUT3 159 aa17.4■□□□□ 0.38
HMGA2-206ENST00000536545 FBLL1A6NHQ2 334 aaKnown RBP17.4■□□□□ 0.38
HMGA2-206ENST00000536545 A8MWL6 223 aa17.4■□□□□ 0.38
HMGA2-206ENST00000536545 GLMPQ8WWB7 406 aa17.4■□□□□ 0.38
HMGA2-206ENST00000536545 HOXA3O43365 443 aaPredicted RBP17.39■□□□□ 0.37
HMGA2-206ENST00000536545 FAM209BQ5JX69 171 aa17.39■□□□□ 0.37
HMGA2-206ENST00000536545 COX8CQ7Z4L0 72 aa17.39■□□□□ 0.37
HMGA2-206ENST00000536545 GTSF1Q8WW33 167 aa17.39■□□□□ 0.37
HMGA2-206ENST00000536545 GFRA4Q9GZZ7 299 aa17.39■□□□□ 0.37
HMGA2-206ENST00000536545 ZNF702PQ9H963 129 aa17.39■□□□□ 0.37
HMGA2-206ENST00000536545 TEX15Q9BXT5 2789 aa17.39■□□□□ 0.37
HMGA2-206ENST00000536545 S100A2P29034 98 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 C8orf49Q96NF6 230 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 TRAV8-2A0A0B4J237 113 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 HLA-DQA1P01909 254 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 LCN12Q6JVE5 192 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 TCF24Q7RTU0 167 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 HIST1H2BLQ99880 126 aa17.38■□□□□ 0.37
HMGA2-206ENST00000536545 A0A1B0GXF2 115 aa17.37■□□□□ 0.37
HMGA2-206ENST00000536545 ZNF705FA8MVS1 300 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-206ENST00000536545 CRIP1P50238 77 aa17.37■□□□□ 0.37
HMGA2-206ENST00000536545 C8orf86Q6ZUL3 223 aa17.37■□□□□ 0.37
HMGA2-206ENST00000536545 ATP5L2Q7Z4Y8 100 aa17.37■□□□□ 0.37
HMGA2-206ENST00000536545 FAM231BA6NCW3 169 aa17.36■□□□□ 0.37
HMGA2-206ENST00000536545 C10orf99Q6UWK7 81 aa17.36■□□□□ 0.37
HMGA2-206ENST00000536545 VGLL1Q99990 258 aa17.36■□□□□ 0.37
HMGA2-206ENST00000536545 NPFFR1Q9GZQ6 430 aa17.36■□□□□ 0.37
HMGA2-206ENST00000536545 SMAD7O15105 426 aaKnown RBP17.35■□□□□ 0.37
HMGA2-206ENST00000536545 RNF182Q8N6D2 247 aa17.35■□□□□ 0.37
HMGA2-206ENST00000536545 OR2D3Q8NGH3 330 aa17.35■□□□□ 0.37
HMGA2-206ENST00000536545 MRPL53Q96EL3 112 aaKnown RBP17.35■□□□□ 0.37
HMGA2-206ENST00000536545 PDZD2O15018 2839 aa17.35■□□□□ 0.37
HMGA2-206ENST00000536545 FABP4P15090 132 aa17.35■□□□□ 0.37
HMGA2-206ENST00000536545 GDF5OSQ5U4N7 250 aa17.35■□□□□ 0.37
HMGA2-206ENST00000536545 PRR25Q96S07 402 aa17.35■□□□□ 0.37
HMGA2-206ENST00000536545 PEF1Q9UBV8 284 aaKnown RBP17.35■□□□□ 0.37
HMGA2-206ENST00000536545 A0A1B0GUS0 222 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 RBAKDNA6NC62 111 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 PRAC2D3DTV9 90 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 CT45A10P0DMU9 189 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 RAB4BP61018 213 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 SAPCD1Q5SSQ6 148 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 RBPMS2Q6ZRY4 209 aaKnown RBP17.34■□□□□ 0.37
HMGA2-206ENST00000536545 OR10D4PQ8NGN7 298 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 Q8TAT8 98 aa17.34■□□□□ 0.37
HMGA2-206ENST00000536545 GRIFINA4D1Z8 144 aa17.33■□□□□ 0.37
HMGA2-206ENST00000536545 AMBPP02760 352 aa17.33■□□□□ 0.37
HMGA2-206ENST00000536545 SIGLECL1Q8N7X8 197 aa17.33■□□□□ 0.36
HMGA2-206ENST00000536545 MYOZ3Q8TDC0 251 aa17.33■□□□□ 0.36
HMGA2-206ENST00000536545 TP53TG3Q9ULZ0 132 aa17.33■□□□□ 0.36
HMGA2-206ENST00000536545 CCDC168Q8NDH2 2452 aa17.33■□□□□ 0.36
HMGA2-206ENST00000536545 GZMBP10144 247 aa17.32■□□□□ 0.36
HMGA2-206ENST00000536545 CRISP2P16562 243 aa17.32■□□□□ 0.36
HMGA2-206ENST00000536545 TEX29Q8N6K0 151 aa17.32■□□□□ 0.36
HMGA2-206ENST00000536545 PGLYRP4Q96LB8 373 aa17.32■□□□□ 0.36
HMGA2-206ENST00000536545 PACRGQ96M98 296 aaPredicted RBP17.32■□□□□ 0.36
HMGA2-206ENST00000536545 FOXE3Q13461 319 aa17.31■□□□□ 0.36
HMGA2-206ENST00000536545 IL17RELQ6ZVW7 336 aa17.31■□□□□ 0.36
HMGA2-206ENST00000536545 GPHB5Q86YW7 130 aa17.31■□□□□ 0.36
HMGA2-206ENST00000536545 UNC79Q9P2D8 2635 aa17.31■□□□□ 0.36
HMGA2-206ENST00000536545 FLNAP21333 2647 aaKnown RBP17.31■□□□□ 0.36
HMGA2-206ENST00000536545 ZNF469Q96JG9 3925 aaPredicted RBP17.3■□□□□ 0.36
HMGA2-206ENST00000536545 SH2D1AO60880 128 aa17.3■□□□□ 0.36
HMGA2-206ENST00000536545 APCSP02743 223 aa17.3■□□□□ 0.36
HMGA2-206ENST00000536545 FOXA3P55318 350 aaPredicted RBP17.3■□□□□ 0.36
HMGA2-206ENST00000536545 HBBP68871 147 aa17.3■□□□□ 0.36
HMGA2-206ENST00000536545 SLAQ13239 276 aa17.3■□□□□ 0.36
HMGA2-206ENST00000536545 FAM162BQ5T6X4 162 aa17.3■□□□□ 0.36
HMGA2-206ENST00000536545 Q8N2B8 174 aa17.3■□□□□ 0.36
HMGA2-206ENST00000536545 TMEM256Q8N2U0 113 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms