RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SUMO3P55854 103 aaPredicted RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 NSUN5P1Q3KNT7 163 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 SLC25A53Q5H9E4 307 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 Q6ZS49 121 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 TEN1Q86WV5 123 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 SPTSSAQ969W0 71 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 FOXC2Q99958 501 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 C7orf69Q9H7B7 122 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 KLF12Q9Y4X4 402 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 NAV3Q8IVL0 2385 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 ASH1LQ9NR48 2969 aaKnown RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 BOD1L1Q8NFC6 3051 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 EP300Q09472 2414 aaPredicted RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 PRSS46E5RG02 174 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 PEX7O00628 323 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 RS1O15537 224 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 ZFAND5O76080 213 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 NGFP01138 241 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 OXTP01178 125 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 P01737 135 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 CD7P09564 240 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 P0C879 139 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 HERVK_113P63121 156 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 KLRB1Q12918 225 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 KRTAP27-1Q3LI81 207 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 ZNF329Q86UD4 541 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 OR1L4Q8NGR5 311 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 NTN5Q8WTR8 489 aaPredicted RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 RPEQ96AT9 228 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 RPP21Q9H633 154 aaKnown RBP2.95□□□□□ -1.94
MCF2-210ENST00000536274 ALKBH4Q9NXW9 302 aa2.95□□□□□ -1.94
MCF2-210ENST00000536274 DMXL1Q9Y485 3027 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 IGHV3-21A0A0B4J1V1 117 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 RBAKDNA6NC62 111 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 PGPA6NDG6 321 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 MBD3L4A6NDZ8 208 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 MBD3L3A6NE82 208 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 MBD3L5A6NJ08 208 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 NPIPB11E5RHQ5 1161 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 NPFFO15130 113 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 HOXA3O43365 443 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 IL4P05112 153 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 ELANEP08246 267 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 MYCNOSP40205 109 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 GFERP55789 205 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 FGF12P61328 243 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 LGALS9BQ3B8N2 356 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 RPL39P5Q59GN2 51 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 RUSC1-AS1Q66K80 236 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 LGALS9CQ6DKI2 356 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 DUX4L9Q6RFH8 374 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 ZNF493Q6ZR52 646 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SLC37A2Q8TED4 501 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SRSF12Q8WXF0 261 aaKnown RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 ODF3Q96PU9 254 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 TXNDC17Q9BRA2 123 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SLC25A2Q9BXI2 301 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 IFI27L2Q9H2X8 130 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 AHCTF1Q8WYP5 2266 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 PRR19A6NJB7 356 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SYNGR3O43761 229 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 NPYP01303 97 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 IGKV3-11P04433 115 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 APELAP0DMC3 54 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 CRYGSP22914 178 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 FOXG1P55316 489 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 ZNF56Q15929 161 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SLC22A18ASQ8N1D0 253 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SLC25A45Q8N413 288 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 PLEKHB2Q96CS7 222 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 BEX4Q9NWD9 120 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 COL6A6A6NMZ7 2263 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 TRAV41A0A0B4J266 112 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 OVOL3O00110 214 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 WNT9BO14905 357 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 PROP1O75360 226 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 MPV17P39210 176 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 ZNF134P52741 427 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 IGLV3-21P80748 117 aaPredicted RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 IL11RAQ14626 422 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 C9orf153Q5TBE3 101 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 PRNTQ86SH4 94 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 C10orf126Q8N4M7 172 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 FAM167A-AS1Q96KT0 104 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 DUX3Q96PT4 197 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 TMEM133Q9H2Q1 129 aa2.94□□□□□ -1.94
MCF2-210ENST00000536274 MRPL35Q9NZE8 188 aaKnown RBP2.94□□□□□ -1.94
MCF2-210ENST00000536274 FAM90A20PA6NIJ5 464 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 A8MWV9 139 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 EFNA4P52798 201 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 FOXF2Q12947 444 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 TMEM78Q5T7P6 136 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 SIGLEC15Q6ZMC9 328 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 RPRMLQ8N4K4 120 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 ZNF441Q8N8Z8 693 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 GATD1Q8NB37 220 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 KLHL30-AS1Q8NEE0 82 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms