RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 LCN15Q6UWW0 184 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 FOXI2Q6ZQN5 318 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 TMUB2Q71RG4 321 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 EXOC3-AS1Q8N2X6 119 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 SLC35B3Q9H1N7 401 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 HIST1H1EP10412 219 aaKnown RBP9.54□□□□□ -0.88
CHFR-210ENST00000535527 SPP1P10451 314 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 FHITP49789 147 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 SNRPD3P62318 126 aaKnown RBP9.54□□□□□ -0.88
CHFR-210ENST00000535527 CTAG1AP78358 180 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 PSG3Q16557 428 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 CSNK1G2-AS1Q8NCQ2 148 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 OR10G4Q8NGN3 311 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 OR10G9Q8NGN4 311 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 OR10G7Q8NGN6 311 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 BLNKQ8WV28 456 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 CLEC5AQ9NY25 188 aa9.54□□□□□ -0.88
CHFR-210ENST00000535527 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
CHFR-210ENST00000535527 RBMY1A1P0DJD3 496 aaKnown RBP9.53□□□□□ -0.88
CHFR-210ENST00000535527 RBMY1CP0DJD4 496 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 ARL14EPLP0DKL9 152 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 CNN1P51911 297 aaKnown RBP9.53□□□□□ -0.88
CHFR-210ENST00000535527 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
CHFR-210ENST00000535527 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
CHFR-210ENST00000535527 STHQ8IWL8 128 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 ZNF738Q8NE65 137 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 KIR2DL5BQ8NHK3 375 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 RAB24Q969Q5 203 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 SPATA25Q9BR10 227 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 PAXXQ9BUH6 204 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 EDA2RQ9HAV5 297 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 HYDINQ4G0P3 5121 aa9.53□□□□□ -0.88
CHFR-210ENST00000535527 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 OR7C2O60412 319 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 STAG3L2P0CL84 134 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 STAG3L3P0CL85 134 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 ID1P41134 155 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 CDC34P49427 236 aaPredicted RBP9.52□□□□□ -0.89
CHFR-210ENST00000535527 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
CHFR-210ENST00000535527 RHOBP62745 196 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 UBE2L3P68036 154 aaKnown RBP9.52□□□□□ -0.89
CHFR-210ENST00000535527 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 RNF141Q8WVD5 230 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 RPUSD4Q96CM3 377 aaKnown RBP9.52□□□□□ -0.89
CHFR-210ENST00000535527 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 CSTL1Q9H114 145 aa9.52□□□□□ -0.89
CHFR-210ENST00000535527 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 TAAR5O14804 337 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 CRXO43186 299 aaPredicted RBP9.51□□□□□ -0.89
CHFR-210ENST00000535527 ZNF253O75346 499 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 JTBO76095 146 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 NBEAP1P0C6P0 100 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 APOC4P55056 127 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 ZFAND6Q6FIF0 208 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
CHFR-210ENST00000535527 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 RNF183Q96D59 192 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
CHFR-210ENST00000535527 TMPRSS5Q9H3S3 457 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 X6R8D5 127 aa9.51□□□□□ -0.89
CHFR-210ENST00000535527 IGKV2-40A0A087WW87 121 aaPredicted RBP9.5□□□□□ -0.89
CHFR-210ENST00000535527 M0R2Z0 102 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 IGKV2D-40P01614 121 aaPredicted RBP9.5□□□□□ -0.89
CHFR-210ENST00000535527 NMBP08949 121 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 S100A7P31151 101 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 FGF8P55075 233 aaPredicted RBP9.5□□□□□ -0.89
CHFR-210ENST00000535527 SERF2P84101 59 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
CHFR-210ENST00000535527 ERCC8Q13216 396 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 ICAM4Q14773 271 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 KHDC3LQ587J8 217 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 STOML3Q8TAV4 291 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 TMED6Q8WW62 240 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 GNPNAT1Q96EK6 184 aaPredicted RBP9.5□□□□□ -0.89
CHFR-210ENST00000535527 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
CHFR-210ENST00000535527 KANTRA0A1W2PQU2 76 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 GCHFRP30047 84 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 EIF5AP63241 154 aaKnown RBP9.49□□□□□ -0.89
CHFR-210ENST00000535527 PDE6HQ13956 83 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 GUK1Q16774 197 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 SAMD13Q5VXD3 122 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 Q6ZWC4 215 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 BAP18Q8IXM2 172 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 SVBPQ8N300 66 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 Q9H3A6 140 aa9.49□□□□□ -0.89
CHFR-210ENST00000535527 GGTLC3B5MD39 225 aa9.48□□□□□ -0.89
CHFR-210ENST00000535527 NPIPB6E9PJ23 425 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms