RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 LOC285556D6RIA3 1793 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 NRXN3Q9Y4C0 1643 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 MED1Q15648 1581 aaPredicted RBP2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 POLEQ07864 2286 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 PCDH15Q96QU1 1955 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 IGLV4-60A0A075B6I1 120 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 hCG_1818297A0A087WSY0 165 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 IGKV1D-8A0A087WSZ0 117 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 A0A1B0GXF2 115 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 NAP1L6A6NFF2 107 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 A8MT66 165 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 H3BMG7 143 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 SYS1-DBNDD2H3BUS1 97 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 HCRTO43612 131 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 RBP4P02753 201 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 FABP2P12104 132 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 CRYGSP22914 178 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 RPS24P62847 133 aaKnown RBP2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF90Q03938 601 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 ELOCQ15369 112 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 PMCHL1Q16048 86 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 NSUN5P1Q3KNT7 163 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 LINC00303Q3SY05 128 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 ETDBQ3ZM63 59 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 MRPL2Q5T653 305 aaKnown RBP2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 LYRM7Q5U5X0 104 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 UNQ9165/PRO28630Q6UXU0 137 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF493Q6ZR52 646 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 AAED1Q7RTV5 226 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF571Q7Z3V5 609 aaPredicted RBP2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 TRAPPC6BQ86SZ2 158 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 C6orf223Q8N319 242 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 CMTM2Q8TAZ6 248 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 BORCS8Q96FH0 119 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 TBL1YQ9BQ87 522 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 SPANXDQ9BXN6 97 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 COMMD5Q9GZQ3 224 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 POMKQ9H5K3 350 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 PLEKHF2Q9H8W4 249 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 LSM2Q9Y333 95 aaKnown RBP2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 COQ4Q9Y3A0 265 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 DNAJC15Q9Y5T4 150 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 V9GY05 133 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 TOGARAM1Q9Y4F4 1720 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 MRC1P22897 1456 aa2.24□□□□□ -2.05
ATPAF1-211ENST00000534216 PAPPA2Q9BXP8 1791 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 LMO7Q8WWI1 1683 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 TRAV27A0A087WT01 109 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 TRBV6-7A0A0A0MS04 114 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 A0A0D9SFI3 127 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 C3orf85A0A1B0GTC6 90 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 LOC285095A0A1B0GVY8 99 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 PLAC8L1A1L4L8 177 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 RBAKDNA6NC62 111 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 KNCNA6PVL3 124 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 ARL6IP5O75915 188 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 GYPAP02724 150 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 SRP19P09132 144 aaKnown RBP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF286BP0CG31 522 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 COX5AP20674 150 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 CBLN1P23435 193 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 HLA-DMBP28068 263 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 RPL22P35268 128 aaKnown RBP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 ASIPP42127 132 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 PSMB3P49720 205 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 SUB1P53999 127 aaKnown RBP eCLIP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 TAS2R45P59539 299 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 RPS11P62280 158 aaKnown RBP eCLIP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 MSMO1Q15800 293 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 NMSQ5H8A3 153 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 C22orf39Q6P5X5 142 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 MORN3Q6PF18 240 aaPredicted RBP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 SLC25A34Q6PIV7 304 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 ANKRD29Q8N6D5 301 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 LY6G5BQ8NDX9 201 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 OR5H2Q8NGV7 314 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 OR51H1Q8NH63 302 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 STAG3L4Q8TBR4 150 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 SCGB1C1Q8TD33 95 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 PPDPFLQ8WWR9 84 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 C18orf15Q96N68 181 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 AQP10Q96PS8 301 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 GPX7Q96SL4 187 aaPredicted RBP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 SHANK2-AS3Q9BTD1 123 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 MRPL20Q9BYC9 149 aaKnown RBP2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 AICDAQ9GZX7 198 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 AGPAT4-IT1Q9H0P7 198 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 PCTPQ9UKL6 214 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF835Q9Y2P0 537 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 LCTP09848 1927 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 PTPRSQ13332 1948 aa2.23□□□□□ -2.05
ATPAF1-211ENST00000534216 DOT1LQ8TEK3 1739 aa2.22□□□□□ -2.05
ATPAF1-211ENST00000534216 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.22□□□□□ -2.05
ATPAF1-211ENST00000534216 PLXNA2O75051 1894 aa2.22□□□□□ -2.05
ATPAF1-211ENST00000534216 UBR3Q6ZT12 1888 aa2.22□□□□□ -2.05
ATPAF1-211ENST00000534216 TRBV19A0A075B6N1 114 aa2.22□□□□□ -2.05
ATPAF1-211ENST00000534216 TRAV12-2A0A075B6T6 113 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms