RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 LSM10Q969L4 123 aaKnown RBP2.56□□□□□ -2
CSMD3-210ENST00000534172 CLDN23Q96B33 292 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 NEURL3Q96EH8 262 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 C2orf50Q96LR7 162 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 C20orf78Q9BR46 151 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 NAA60Q9H7X0 242 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 BCL2L10Q9HD36 194 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 TP53TG3Q9ULZ0 132 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 POLR1DQ9Y2S0 133 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 MPC1Q9Y5U8 109 aa2.56□□□□□ -2
CSMD3-210ENST00000534172 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
CSMD3-210ENST00000534172 TNRC6AQ8NDV7 1962 aaKnown RBP2.55□□□□□ -2
CSMD3-210ENST00000534172 CHD7Q9P2D1 2997 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 TMED7-TICAM2A0A0A6YYA0 188 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 A0A1B0GV50 99 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 ANGPTL7O43827 346 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 DPM2O94777 84 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 CPMP14384 443 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 IL3RAP26951 378 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 PRSS3P35030 304 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 OPRK1P41145 380 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 PSMB3P49720 205 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 KRTAP10-12P60413 245 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 HERVK_113P63121 156 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 SLC38A11Q08AI6 406 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 CLEC12BQ2HXU8 276 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 C9orf153Q5TBE3 101 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 AMTNQ6UX39 209 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 HRCT1Q6UXD1 115 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 SSX8Q7RTT4 187 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 SGPP2Q8IWX5 399 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 C11orf72Q8NBR9 251 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 OTOSQ8NHW6 89 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 PPDPFLQ8WWR9 84 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 ADAT3Q96EY9 351 aaPredicted RBP2.55□□□□□ -2
CSMD3-210ENST00000534172 SMIM14Q96QK8 99 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 PAXXQ9BUH6 204 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 CHST6Q9GZX3 395 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 TMEM222Q9H0R3 208 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 RNASE7Q9H1E1 156 aaKnown RBP2.55□□□□□ -2
CSMD3-210ENST00000534172 PKIGQ9Y2B9 76 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 SLC25A15Q9Y619 301 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 DNAH14Q0VDD8 3507 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 IGF2RP11717 2491 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 NYNRINQ9P2P1 1898 aaKnown RBP2.55□□□□□ -2
CSMD3-210ENST00000534172 NF1P21359 2839 aa2.55□□□□□ -2
CSMD3-210ENST00000534172 TRBV20-1A0A075B6N2 111 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 RIIAD1A6NNX1 92 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 UQCRQO14949 82 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 NDUFC2O95298 119 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 IGHMP01871 453 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ATP5G1P05496 136 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 BCL2P10415 239 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ATP5G3P48201 142 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 NMUP48645 174 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 NOVP48745 357 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 SMIM11AP58511 58 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 TMEM258P61165 79 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 UBE2G1P62253 170 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ELOCQ15369 112 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ETDBQ3ZM63 59 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 SPRNQ5BIV9 151 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 IBA57Q5T440 356 aaKnown RBP2.54□□□□□ -2
CSMD3-210ENST00000534172 Q5XG85 94 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 NCBP2-AS2Q69YL0 99 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 TMEM136Q6ZRR5 245 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ZNF550Q7Z398 422 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 C10orf126Q8N4M7 172 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 OR8B3Q8NGG8 313 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ZNF563Q8TA94 476 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 RAB37Q96AX2 223 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 RNF185Q96GF1 192 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 PRELID3AQ96N28 172 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 MCEEQ96PE7 176 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 OR8B2Q96RD0 313 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 DEFB127Q9H1M4 99 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 FBXL15Q9H469 300 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 ZNF835Q9Y2P0 537 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 POLQO75417 2590 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 MCM3APO60318 1980 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 COL6A6A6NMZ7 2263 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 FAM236DA0A1B0GTK5 79 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 M0R2P5 195 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 IGHV3-7P01780 117 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 CECR9P0C854 216 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 SMIM13P0DJ93 91 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 FAM236CP0DP71 79 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 COX8AP10176 69 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 COX7A1P24310 79 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 PRR3P79522 188 aaKnown RBP2.54□□□□□ -2
CSMD3-210ENST00000534172 PRDX1Q06830 199 aaKnown RBP2.54□□□□□ -2
CSMD3-210ENST00000534172 WFDC2Q14508 124 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 KIAA0087Q14695 138 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 Q499Y3 187 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 C1orf158Q8N1D5 194 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 LINC00526Q96FQ7 95 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 SLC25A44Q96H78 314 aaPredicted RBP2.54□□□□□ -2
CSMD3-210ENST00000534172 CDH23Q9H251 3354 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 C21orf62Q9NYP8 219 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms