RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 MANBALQ9NQG1 85 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF586Q9NXT0 402 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 THYN1Q9P016 225 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 UQCR10Q9UDW1 63 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 RFNGQ9Y644 331 aa4.74□□□□□ -1.65
CMTM1-220ENST00000534143 UBE2L5PA0A1B0GUS4 154 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 CBY3A6NI87 242 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ZFP92A6NM28 416 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 DIRC3C9JPN6 131 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM250H0YL14 139 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 K7ERU9 68 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 MPDU1O75352 247 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 NPSP0C0P6 89 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 IGLC1P0CG04 106 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 PF4V1P10720 104 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 UBE2G2P60604 165 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 RPS20P60866 119 aaKnown RBP4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SLC35B1P78383 322 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SERF2P84101 59 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 RUNX1Q01196 453 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ATP5G2Q06055 141 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 C15orf32Q32M92 178 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 COX19Q49B96 90 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TCTEX1D4Q5JR98 221 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ACTL10Q5JWF8 245 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TEX38Q6PEX7 206 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF491Q8N8L2 437 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SPATA3Q8NHX4 192 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF502Q8TBZ5 544 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF414Q96IQ9 312 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ATP6V0BQ99437 205 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TRGV9Q99603 122 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 MGST2Q99735 147 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SCRT1Q9BWW7 348 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 GGTLC1Q9BX51 225 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SH3BGRL3Q9H299 93 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF355PQ9NSJ1 428 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 C21orf62Q9NYP8 219 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 SLC45A2Q9UMX9 530 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 CHTOPQ9Y3Y2 248 aaKnown RBP4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TIMM9Q9Y5J7 89 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TRAPPC1Q9Y5R8 145 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 S4R3C0 116 aa4.73□□□□□ -1.65
CMTM1-220ENST00000534143 TRAV9-1A0A075B6T8 112 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 TRAV30A0A087WSZ9 112 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.72□□□□□ -1.65
CMTM1-220ENST00000534143 TRBV7-1A0A0A6YYK4 115 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 A0A0G2JLM5 398 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 TCRBV4S1A1TA0A5B7 111 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 CLPSL1A2RUU4 121 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 K7EP13 123 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 IGKV1-17P01599 117 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 PPBPP02775 128 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 TYMSP04818 313 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 CTSGP08311 255 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 LINC00869P0C866 280 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 PROK1P58294 105 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 OR5AU1Q8NGC0 362 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 OR4F5Q8NH21 305 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM37Q8WXS4 190 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 EEF1AKMT3Q96AZ1 226 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 PYGO2Q9BRQ0 406 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 ALKBH7Q9BT30 221 aaPredicted RBP4.72□□□□□ -1.65
CMTM1-220ENST00000534143 RSG1Q9BU20 258 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 NPCDR1Q9BY65 106 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 SLC39A9Q9NUM3 307 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 FUT9Q9Y231 359 aa4.72□□□□□ -1.65
CMTM1-220ENST00000534143 A0A1B0GUS0 222 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 GAGE12BA1L429 117 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 ZNF320A2RRD8 509 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 GNG7O60262 68 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 IGHV3-23P01764 117 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 CLEC3BP05452 202 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 OR5G3P0C626 314 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 GATA2P23769 480 aaPredicted RBP4.71□□□□□ -1.66
CMTM1-220ENST00000534143 FHITP49789 147 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 PLP1P60201 277 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 YPEL3P61236 119 aaPredicted RBP4.71□□□□□ -1.66
CMTM1-220ENST00000534143 ZNF90Q03938 601 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 RAB31Q13636 194 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 TIGITQ495A1 244 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 Q56UQ5 140 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 MIC13Q5XKP0 118 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 SPSB3Q6PJ21 355 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 BAGE3Q86Y29 109 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.71□□□□□ -1.66
CMTM1-220ENST00000534143 UBE2E2Q96LR5 201 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 CHRDL1Q9BU40 450 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 ELOVL1Q9BW60 279 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 GNB4Q9HAV0 340 aa4.71□□□□□ -1.66
CMTM1-220ENST00000534143 DKK2Q9UBU2 259 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms