RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LOC389332A0A1B0GUA5 103 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 SHISA9B4DS77 424 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 A0A0G2JLM5 398 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 ZNF785A8K8V0 405 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 HERV-K104P63124 156 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 OTORQ9NRC9 128 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 IGHV3OR16-8A0A075B7F1 116 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 C9orf118A6NHY6 69 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-226ENST00000533820 IL4P05112 153 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 FCGR2BP31994 310 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-226ENST00000533820 CD300EQ496F6 205 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-226ENST00000533820 LINC01560Q8TB33 94 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 IGLV1-47P01700 117 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 HIST1H1AQ02539 215 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-226ENST00000533820 ZNF492Q9P255 531 aa15.28■□□□□ 0.04
CAPN1-226ENST00000533820 IGHV3-23P01764 117 aa15.27■□□□□ 0.04
CAPN1-226ENST00000533820 CRYGBP07316 175 aa15.27■□□□□ 0.04
CAPN1-226ENST00000533820 NEU4Q8WWR8 484 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-226ENST00000533820 PTPRQQ9UMZ3 2332 aa15.27■□□□□ 0.04
CAPN1-226ENST00000533820 TIMM23O14925 209 aa15.27■□□□□ 0.03
CAPN1-226ENST00000533820 APOHP02749 345 aaPredicted RBP15.27■□□□□ 0.03
CAPN1-226ENST00000533820 I3L2K1 104 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 FAM106CPP0CH98 169 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 C5orf64Q2M2E5 130 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 FAM106AQ4KMX7 169 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 C8orf49Q96NF6 230 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 MAP1LC3CQ9BXW4 147 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 NGBQ9NPG2 151 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 IGF2RP11717 2491 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 A0A1B0GUT8 65 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 HES1Q14469 280 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 TMEM97Q5BJF2 176 aa15.26■□□□□ 0.03
CAPN1-226ENST00000533820 C8orf31Q8N9H6 132 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 TMEM191AQ9H0A3 160 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 SPTAN1Q13813 2472 aaKnown RBP15.25■□□□□ 0.03
CAPN1-226ENST00000533820 IGHV3-35A0A0C4DH35 117 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 ATP5G2Q06055 141 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 CT83Q5H943 113 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 CHCHD1Q96BP2 118 aaKnown RBP15.25■□□□□ 0.03
CAPN1-226ENST00000533820 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-226ENST00000533820 IGFL4Q6B9Z1 124 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 PRSS3P2Q8NHM4 247 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 MRAP2Q96G30 205 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 SCRT2Q9NQ03 307 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 PGPEP1Q9NXJ5 209 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 KAAG1Q9UBP8 84 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 PSG8Q9UQ74 426 aa15.25■□□□□ 0.03
CAPN1-226ENST00000533820 BPIFA4PQ86YQ2 179 aa15.24■□□□□ 0.03
CAPN1-226ENST00000533820 TRBV19A0A075B6N1 114 aa15.24■□□□□ 0.03
CAPN1-226ENST00000533820 LIPFP07098 398 aa15.24■□□□□ 0.03
CAPN1-226ENST00000533820 SMIM17P0DL12 118 aa15.24■□□□□ 0.03
CAPN1-226ENST00000533820 KLRD1Q13241 179 aa15.24■□□□□ 0.03
CAPN1-226ENST00000533820 HLA-DRB1P01911 266 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 CRIP1P50238 77 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 KIR3DS1Q14943 382 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 Q8NA96 180 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 K7EIM0 57 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 NCR2O95944 276 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 OR5AL1P0C617 328 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 GRNP28799 593 aaKnown RBP15.23■□□□□ 0.03
CAPN1-226ENST00000533820 OR8A1Q8NGG7 326 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 NDFIP1Q9BT67 221 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 SCNM1Q9BWG6 230 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 AP5S1Q9NUS5 200 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 SOX21Q9Y651 276 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-226ENST00000533820 TMEM213A2RRL7 107 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 LOXL1Q08397 574 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-226ENST00000533820 FAM162BQ5T6X4 162 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 GFRA4Q9GZZ7 299 aa15.23■□□□□ 0.03
CAPN1-226ENST00000533820 ADAMTSL5Q6ZMM2 481 aa15.22■□□□□ 0.03
CAPN1-226ENST00000533820 RNF125Q96EQ8 232 aa15.22■□□□□ 0.03
CAPN1-226ENST00000533820 NPIPB6E9PJ23 425 aa15.22■□□□□ 0.03
CAPN1-226ENST00000533820 HAX1O00165 279 aa15.22■□□□□ 0.03
CAPN1-226ENST00000533820 C2orf91Q6ZV80 131 aa15.22■□□□□ 0.03
CAPN1-226ENST00000533820 IFI27P40305 119 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-226ENST00000533820 SIGLEC15Q6ZMC9 328 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 FA2HQ7L5A8 372 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 FAM90A27PA6NNH2 459 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 PVRIGQ6DKI7 326 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 PET117Q6UWS5 81 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 ZNF491Q8N8L2 437 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 SRSF8Q9BRL6 282 aaKnown RBP15.21■□□□□ 0.03
CAPN1-226ENST00000533820 SHANK2-AS3Q9BTD1 123 aa15.21■□□□□ 0.03
CAPN1-226ENST00000533820 CRXO43186 299 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-226ENST00000533820 TM4SF20Q53R12 229 aa15.2■□□□□ 0.02
CAPN1-226ENST00000533820 CD3EP07766 207 aa15.2■□□□□ 0.02
CAPN1-226ENST00000533820 RIGQ13278 110 aa15.2■□□□□ 0.02
CAPN1-226ENST00000533820 WFDC3Q8IUB2 231 aa15.2■□□□□ 0.02
CAPN1-226ENST00000533820 IGKV2-40A0A087WW87 121 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-226ENST00000533820 H3BRM9 83 aa15.2■□□□□ 0.02
CAPN1-226ENST00000533820 IGKV2D-40P01614 121 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-226ENST00000533820 SEC11AP67812 179 aa15.2■□□□□ 0.02
CAPN1-226ENST00000533820 OVOL3O00110 214 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 TCTEX1D4Q5JR98 221 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 AMN1Q8IY45 258 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 Q8TAT8 98 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 A0A1W2PPM0 123 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 SMKR1H3BMG3 65 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 RNF183Q96D59 192 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms