RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SLC17A3O00476 420 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
COPB1-210ENST00000533533 DEFB4AO15263 64 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 EIF3GO75821 320 aaKnown RBP eCLIP6.31□□□□□ -1.4
COPB1-210ENST00000533533 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
COPB1-210ENST00000533533 CXCL2P19875 107 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 PSG9Q00887 426 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 PSG3Q16557 428 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 GUK1Q16774 197 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 FAM122CQ6P4D5 195 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 RPUSD4Q96CM3 377 aaKnown RBP6.31□□□□□ -1.4
COPB1-210ENST00000533533 PAXXQ9BUH6 204 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 SLC25A2Q9BXI2 301 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 C1QTNF4Q9BXJ3 329 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 MRPL32Q9BYC8 188 aaKnown RBP6.31□□□□□ -1.4
COPB1-210ENST00000533533 SLC35B3Q9H1N7 401 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 OR51M1Q9H341 326 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 HRH4Q9H3N8 390 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 ZNF331Q9NQX6 463 aaPredicted RBP6.31□□□□□ -1.4
COPB1-210ENST00000533533 APLNQ9ULZ1 77 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 TNFSF18Q9UNG2 199 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
COPB1-210ENST00000533533 RNF222A6NCQ9 220 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 ZNF705FA8MVS1 300 aaPredicted RBP6.3□□□□□ -1.4
COPB1-210ENST00000533533 IGLL5B9A064 214 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 OR10J4P0C629 311 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 IGLC2P0DOY2 106 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 HIST1H1EP10412 219 aaKnown RBP6.3□□□□□ -1.4
COPB1-210ENST00000533533 ATP6V0CP27449 155 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 CNN1P51911 297 aaKnown RBP6.3□□□□□ -1.4
COPB1-210ENST00000533533 TAS2R45P59539 299 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 RAB2AP61019 212 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 TMEM41BQ5BJD5 291 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 RPL7L1Q6DKI1 246 aaKnown RBP6.3□□□□□ -1.4
COPB1-210ENST00000533533 OR10G4Q8NGN3 311 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 OR10G9Q8NGN4 311 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 OR10G7Q8NGN6 311 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 PARD6GQ9BYG4 376 aaPredicted RBP6.3□□□□□ -1.4
COPB1-210ENST00000533533 ZNF586Q9NXT0 402 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 TMEM14CQ9P0S9 112 aa6.3□□□□□ -1.4
COPB1-210ENST00000533533 TRBV19A0A075B6N1 114 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 C11orf94C9JXX5 98 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 G3V3Q6 166 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 HMGB3O15347 200 aaKnown RBP6.29□□□□□ -1.4
COPB1-210ENST00000533533 GIG44P09565 113 aaPredicted RBP6.29□□□□□ -1.4
COPB1-210ENST00000533533 NBEAP1P0C6P0 100 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 M6PRP20645 277 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 UBE2L3P68036 154 aaKnown RBP6.29□□□□□ -1.4
COPB1-210ENST00000533533 SPINK13Q1W4C9 94 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 KHDC3LQ587J8 217 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 EXOC3-AS1Q8N2X6 119 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 OR8A1Q8NGG7 326 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 OR10J6PQ8NGY7 276 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 FAM167A-AS1Q96KT0 104 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 TMEM208Q9BTX3 173 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 SH3BGRL3Q9H299 93 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 AAMDCQ9H7C9 122 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
COPB1-210ENST00000533533 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 M0R2Z0 102 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 ICAM4Q14773 271 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 LINC00336Q6ZUF6 198 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 IQCF2Q8IXL9 164 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 Q8NAQ8 132 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 OR2G3Q8NGZ4 309 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 GNPNAT1Q96EK6 184 aaPredicted RBP6.28□□□□□ -1.4
COPB1-210ENST00000533533 SAT2Q96F10 170 aaPredicted RBP6.28□□□□□ -1.4
COPB1-210ENST00000533533 PSMG3Q9BT73 122 aaPredicted RBP6.28□□□□□ -1.4
COPB1-210ENST00000533533 GOLT1BQ9Y3E0 138 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
COPB1-210ENST00000533533 TRAV12-2A0A075B6T6 113 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 IGHV4-28A0A0C4DH34 117 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 KANTRA0A1W2PQU2 76 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 J3KRW8 73 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 M0R3E3 92 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 TAAR5O14804 337 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 PFDN1O60925 122 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 ZNF253O75346 499 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 NDUFB4O95168 129 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 MBP02144 154 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 CDC34P49427 236 aaPredicted RBP6.27□□□□□ -1.41
COPB1-210ENST00000533533 RANP62826 216 aaKnown RBP6.27□□□□□ -1.41
COPB1-210ENST00000533533 PDE6HQ13956 83 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 Q6ZNX1 250 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 BAP18Q8IXM2 172 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 FXYD5Q96DB9 178 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 PHYHIPLQ96FC7 376 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 ARPC5LQ9BPX5 153 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 PRELID1Q9Y255 219 aa6.27□□□□□ -1.41
COPB1-210ENST00000533533 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
COPB1-210ENST00000533533 INSP01308 110 aa6.26□□□□□ -1.41
COPB1-210ENST00000533533 AMBPP02760 352 aa6.26□□□□□ -1.41
COPB1-210ENST00000533533 RBMY1A1P0DJD3 496 aaKnown RBP6.26□□□□□ -1.41
COPB1-210ENST00000533533 RBMY1CP0DJD4 496 aa6.26□□□□□ -1.41
COPB1-210ENST00000533533 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
COPB1-210ENST00000533533 MIFP14174 115 aa6.26□□□□□ -1.41
COPB1-210ENST00000533533 CSN1S1P47710 185 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms