RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 HLA-DRB4P13762 266 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 UBE2G2P60604 165 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 RANP62826 216 aaKnown RBP5.8□□□□□ -1.48
COMMD9-207ENST00000533308 GNG5P63218 68 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 HIST1H1AQ02539 215 aaPredicted RBP5.8□□□□□ -1.48
COMMD9-207ENST00000533308 GUK1Q16774 197 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 PQLC2Q6ZP29 291 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 TRPT1Q86TN4 253 aaKnown RBP5.8□□□□□ -1.48
COMMD9-207ENST00000533308 SUN5Q8TC36 379 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 SFT2D1Q8WV19 159 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 PCNPQ8WW12 178 aaKnown RBP5.8□□□□□ -1.48
COMMD9-207ENST00000533308 RPUSD4Q96CM3 377 aaKnown RBP5.8□□□□□ -1.48
COMMD9-207ENST00000533308 RPH3ALQ9UNE2 315 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 HLA-DRB4X5D2U9 266 aa5.8□□□□□ -1.48
COMMD9-207ENST00000533308 TENM3Q9P273 2699 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 LOC102724200A0A096LPH7 203 aaPredicted RBP5.79□□□□□ -1.48
COMMD9-207ENST00000533308 ZNF253O75346 499 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 GIG44P09565 113 aaPredicted RBP5.79□□□□□ -1.48
COMMD9-207ENST00000533308 CNN1P51911 297 aaKnown RBP5.79□□□□□ -1.48
COMMD9-207ENST00000533308 CCL20P78556 96 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 ERCC8Q13216 396 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 PDE6HQ13956 83 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 HAGHQ16775 308 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 DPPA3Q6W0C5 159 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 FOXI2Q6ZQN5 318 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 STHQ8IWL8 128 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 OR4B1Q8NGF8 309 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 OR8A1Q8NGG7 326 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 MBD3L1Q8WWY6 194 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 SLC35B3Q9H1N7 401 aa5.79□□□□□ -1.48
COMMD9-207ENST00000533308 DNAH9Q9NYC9 4486 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 PGPA6NDG6 321 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 ZNF705EA8MWA4 302 aaPredicted RBP5.78□□□□□ -1.48
COMMD9-207ENST00000533308 H2AFB1P0C5Y9 115 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 ATP5G3P48201 142 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 CMC4P56277 68 aaPredicted RBP5.78□□□□□ -1.48
COMMD9-207ENST00000533308 PSG9Q00887 426 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 KIR3DS1Q14943 382 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 SAMD13Q5VXD3 122 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 EIF5AL1Q6IS14 154 aaKnown RBP5.78□□□□□ -1.48
COMMD9-207ENST00000533308 AMTNQ6UX39 209 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 Q8TAT8 98 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 VGLL1Q99990 258 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 B9D2Q9BPU9 175 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 AAMDCQ9H7C9 122 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 CLEC5AQ9NY25 188 aa5.78□□□□□ -1.48
COMMD9-207ENST00000533308 COL7A1Q02388 2944 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 HUWE1Q7Z6Z7 4374 aaKnown RBP5.77□□□□□ -1.49
COMMD9-207ENST00000533308 TRAV8-1A0A0A6YYK1 113 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 FAM74A7A6NL05 159 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 A8MTW9 85 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 TEX46H3BTG2 121 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 M0R2Z0 102 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 CA1P00915 261 aaPredicted RBP5.77□□□□□ -1.49
COMMD9-207ENST00000533308 SLC25A5P05141 298 aaKnown RBP5.77□□□□□ -1.49
COMMD9-207ENST00000533308 RBMY1A1P0DJD3 496 aaKnown RBP5.77□□□□□ -1.49
COMMD9-207ENST00000533308 RBMY1CP0DJD4 496 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 CT45A10P0DMU9 189 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 RAB5CP51148 216 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 RBMY1FQ15415 496 aaKnown RBP5.77□□□□□ -1.49
COMMD9-207ENST00000533308 SPINK13Q1W4C9 94 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 DEFB135Q30KP9 77 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 EBLN2Q6P2I7 272 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 MRPL53Q96EL3 112 aaKnown RBP5.77□□□□□ -1.49
COMMD9-207ENST00000533308 SGK494Q96LW2 274 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 OTORQ9NRC9 128 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 TMEM167BQ9NRX6 74 aa5.77□□□□□ -1.49
COMMD9-207ENST00000533308 TRAV12-2A0A075B6T6 113 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 DIRC3C9JPN6 131 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 NPIPB6E9PJ23 425 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 J3KRW8 73 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 PAGE4O60829 102 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 SUMO1P63165 101 aaKnown RBP5.76□□□□□ -1.49
COMMD9-207ENST00000533308 IFITM2Q01629 132 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 PRR9Q5T870 116 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 TEX261Q6UWH6 196 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 GOLT1AQ6ZVE7 132 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 ZNF680Q8NEM1 530 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 AGPAT4-IT1Q9H0P7 198 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 GNG13Q9P2W3 67 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 XCL2Q9UBD3 114 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 PRELID1Q9Y255 219 aa5.76□□□□□ -1.49
COMMD9-207ENST00000533308 TRAV1-1A0A0B4J248 108 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 TRAV34A0A0B4J273 112 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 A0A1W2PRE2 83 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 CRXO43186 299 aaPredicted RBP5.75□□□□□ -1.49
COMMD9-207ENST00000533308 TCRAP04437 139 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 APOC4P55056 127 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 CST9LP1Q5W188 147 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 Q6ZQT7 251 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 CCDC28AQ8IWP9 274 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 LYPD1Q8N2G4 141 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 C5orf17Q8NAS9 161 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 OR10J6PQ8NGY7 276 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 CMTM2Q8TAZ6 248 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 LINC00479Q96M42 142 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 TM2D3Q9BRN9 247 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 CSTL1Q9H114 145 aa5.75□□□□□ -1.49
COMMD9-207ENST00000533308 KIR2DL5BA0A0G2JN68 375 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms