RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 SFT2D2O95562 160 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 PRB4P10163 310 aaPredicted RBP7.92□□□□□ -1.14
CMTM1-216ENST00000533078 XGP55808 180 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 OR10P1Q8NGE3 313 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 MCFD2Q8NI22 146 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 PARD6GQ9BYG4 376 aaPredicted RBP7.92□□□□□ -1.14
CMTM1-216ENST00000533078 RBM38Q9H0Z9 239 aaKnown RBP7.92□□□□□ -1.14
CMTM1-216ENST00000533078 CCDC59Q9P031 241 aaKnown RBP7.92□□□□□ -1.14
CMTM1-216ENST00000533078 FUT9Q9Y231 359 aa7.92□□□□□ -1.14
CMTM1-216ENST00000533078 K7EP13 123 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 K7EPK0 472 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 SSSCA1O60232 199 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
CMTM1-216ENST00000533078 SNRPCP09234 159 aaKnown RBP7.91□□□□□ -1.14
CMTM1-216ENST00000533078 EVI2AP22794 236 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 GCSHP23434 173 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
CMTM1-216ENST00000533078 POLR2GP62487 172 aaKnown RBP eCLIP7.91□□□□□ -1.14
CMTM1-216ENST00000533078 SLC38A11Q08AI6 406 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 GUK1Q16774 197 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 CNPY1Q3B7I2 92 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 Q6ZSN1 163 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 TOMM5Q8N4H5 51 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 VSIG2Q96IQ7 327 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 GSN-AS1Q9NRJ2 163 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 LY96Q9Y6Y9 160 aa7.91□□□□□ -1.14
CMTM1-216ENST00000533078 A0A087WTM6 91 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 NPIPB6E9PJ23 425 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
CMTM1-216ENST00000533078 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 PPP1R1AQ13522 171 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 RAB31Q13636 194 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 MRPL23Q16540 153 aaKnown RBP7.9□□□□□ -1.14
CMTM1-216ENST00000533078 C10orf113Q5VZT2 155 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 EIF4E3Q8N5X7 224 aaKnown RBP7.9□□□□□ -1.14
CMTM1-216ENST00000533078 ZNF431Q8TF32 576 aaPredicted RBP7.9□□□□□ -1.14
CMTM1-216ENST00000533078 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
CMTM1-216ENST00000533078 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
CMTM1-216ENST00000533078 C7orf71A4D174 169 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 MRPS12O15235 138 aaKnown RBP7.89□□□□□ -1.15
CMTM1-216ENST00000533078 ZNF324O75467 553 aaPredicted RBP7.89□□□□□ -1.15
CMTM1-216ENST00000533078 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
CMTM1-216ENST00000533078 CT45A10P0DMU9 189 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 UBE2MP61081 183 aaKnown RBP7.89□□□□□ -1.15
CMTM1-216ENST00000533078 ID3Q02535 119 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 SPCS2Q15005 226 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 PATE2Q6UY27 113 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 Q6ZRG5 221 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 NEGR1Q7Z3B1 354 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 PCNPQ8WW12 178 aaKnown RBP7.89□□□□□ -1.15
CMTM1-216ENST00000533078 DEDD2Q8WXF8 326 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 ST6GAL2Q96JF0 529 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 SMIM8Q96KF7 97 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 ARPC5LQ9BPX5 153 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 GGACTQ9BVM4 153 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
CMTM1-216ENST00000533078 H3BTX0 84 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 SLC17A3O00476 420 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 AGPAT2O15120 278 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 PSCAO43653 123 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 SCGB1D2O95969 90 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 DNAH10OSP0CZ25 163 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 KRTAP10-1P60331 282 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 C4orf46Q504U0 113 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 PYDC2Q56P42 97 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 C10orf126Q8N4M7 172 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 RAB2BQ8WUD1 216 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 BCL7BQ9BQE9 202 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 LINC00467Q9BRT7 94 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 HHLA3Q9XRX5 114 aa7.88□□□□□ -1.15
CMTM1-216ENST00000533078 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 RGS13O14921 159 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 MPDU1O75352 247 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 IGHV3-53P01767 116 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 SRIP30626 198 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 TMBIM6P55061 237 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 TCL1AP56279 114 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 OPCMLQ14982 345 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 IBA57Q5T440 356 aaKnown RBP7.87□□□□□ -1.15
CMTM1-216ENST00000533078 LYPD5Q6UWN5 251 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 TMEM14EPQ6UXP3 125 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 C12orf45Q8N5I9 185 aaPredicted RBP7.87□□□□□ -1.15
CMTM1-216ENST00000533078 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
CMTM1-216ENST00000533078 MDFICQ9P1T7 246 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 TNFRSF18Q9Y5U5 241 aa7.87□□□□□ -1.15
CMTM1-216ENST00000533078 TRGV4A0A0C4DH28 118 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 LINC00854A0A1B0GVQ3 168 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 SPINK4O60575 86 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 TSC22D2O75157 780 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 ZNF253O75346 499 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 GPX1P07203 203 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 OR4E1P0C645 316 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 TNFSF8P32971 234 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 TAS2R30P59541 319 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 C11orf72Q8NBR9 251 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms