RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 RNF183Q96D59 192 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 FXYD5Q96DB9 178 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 F6UB75 175 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF253O75346 499 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 CXorf1O96002 111 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 IGKV3-20P01619 116 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 STAG3L2P0CL84 134 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 STAG3L3P0CL85 134 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 PRB4P10163 310 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 GCHFRP30047 84 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 RANP62826 216 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 SAT2Q96F10 170 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF503Q96F45 646 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 PHYHIPLQ96FC7 376 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
TRAPPC4-212ENST00000533058 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF705FA8MVS1 300 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 BOLA2-SMG1P6H3BVE0 249 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 NDUFB4O95168 129 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 FHITP49789 147 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 FGF8P55075 233 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 HIST1H1AQ02539 215 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 ICAM4Q14773 271 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 EXOC3-AS1Q8N2X6 119 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 SAV1Q9H4B6 383 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 TMEM167BQ9NRX6 74 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 PPP1R14DQ9NXH3 145 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
TRAPPC4-212ENST00000533058 A0A1B0GV50 99 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 H3BMM0 161 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 HLA-DRB4P13762 266 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 CSN1S1P47710 185 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 GDF5OSQ5U4N7 250 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 Q9H3A6 140 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 HLA-DRB4X5D2U9 266 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 RYR3Q15413 4870 aa9.48□□□□□ -0.89
TRAPPC4-212ENST00000533058 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 STARD9Q9P2P6 4700 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 A0A0J9YX75 114 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 RAB5CP51148 216 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 NUTF2P61970 127 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 FAM74A1Q5RGS3 127 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 TRPT1Q86TN4 253 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 CMTM2Q8TAZ6 248 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 RPH3ALQ9UNE2 315 aa9.47□□□□□ -0.89
TRAPPC4-212ENST00000533058 PGPA6NDG6 321 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 M0R3E3 92 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 CA1P00915 261 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 CNN1P51911 297 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 FXYD7P58549 80 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 ALKAL2Q6UX46 152 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 LYPD1Q8N2G4 141 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 TMPRSS5Q9H3S3 457 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 OTORQ9NRC9 128 aa9.46□□□□□ -0.9
TRAPPC4-212ENST00000533058 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
TRAPPC4-212ENST00000533058 TEX46H3BTG2 121 aa9.45□□□□□ -0.9
TRAPPC4-212ENST00000533058 SULT1A2P50226 295 aa9.45□□□□□ -0.9
TRAPPC4-212ENST00000533058 UBE2G2P60604 165 aa9.45□□□□□ -0.9
TRAPPC4-212ENST00000533058 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-212ENST00000533058 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
TRAPPC4-212ENST00000533058 ZNF705EA8MWA4 302 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-212ENST00000533058 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
TRAPPC4-212ENST00000533058 RXFP4Q8TDU9 374 aa9.44□□□□□ -0.9
TRAPPC4-212ENST00000533058 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
TRAPPC4-212ENST00000533058 RARRES2Q99969 163 aa9.44□□□□□ -0.9
TRAPPC4-212ENST00000533058 AGRNO00468 2067 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 IGKV2-40A0A087WW87 121 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 LCE6AA0A183 80 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 IFNA7P01567 189 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 IGKV2D-40P01614 121 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 ERCC8Q13216 396 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 CST9LP1Q5W188 147 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 SLC35B3Q9H1N7 401 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
TRAPPC4-212ENST00000533058 TENM2Q9NT68 2774 aa9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 HBE1P02100 147 aa9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms