RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ZNF705DP0CH99 300 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF705BP0CI00 300 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-210ENST00000532935 IGLC2P0DOY2 106 aa11.1□□□□□ -0.63
CPSF1-210ENST00000532935 CNN1P51911 297 aaKnown RBP11.1□□□□□ -0.63
CPSF1-210ENST00000532935 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF331Q9NQX6 463 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-210ENST00000532935 ZNF705FA8MVS1 300 aaPredicted RBP11.09□□□□□ -0.63
CPSF1-210ENST00000532935 H3BTX0 84 aa11.09□□□□□ -0.63
CPSF1-210ENST00000532935 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
CPSF1-210ENST00000532935 NEU1Q99519 415 aa11.09□□□□□ -0.63
CPSF1-210ENST00000532935 ATP5SQ99766 215 aa11.09□□□□□ -0.63
CPSF1-210ENST00000532935 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
CPSF1-210ENST00000532935 HRH4Q9H3N8 390 aa11.09□□□□□ -0.63
CPSF1-210ENST00000532935 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
CPSF1-210ENST00000532935 IGHV3OR16-12A0A075B7B8 117 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 H3BQ15 152 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 SLC17A3O00476 420 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 SEC11BP0C7V7 166 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 HIST1H1AQ02539 215 aaPredicted RBP11.08□□□□□ -0.64
CPSF1-210ENST00000532935 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
CPSF1-210ENST00000532935 RPUSD4Q96CM3 377 aaKnown RBP11.08□□□□□ -0.64
CPSF1-210ENST00000532935 PARD6GQ9BYG4 376 aaPredicted RBP11.08□□□□□ -0.64
CPSF1-210ENST00000532935 KCNIP2Q9NS61 270 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
CPSF1-210ENST00000532935 SMIM9A6NGZ8 99 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 AMBPP02760 352 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 PRB4P10163 310 aaPredicted RBP11.07□□□□□ -0.64
CPSF1-210ENST00000532935 GUK1Q16774 197 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 ALKAL2Q6UX46 152 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 RNF141Q8WVD5 230 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
CPSF1-210ENST00000532935 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
CPSF1-210ENST00000532935 C17orf112F2Z3M2 114 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 M0R2Z0 102 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 RAB5CP51148 216 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 GNPNAT1Q96EK6 184 aaPredicted RBP11.06□□□□□ -0.64
CPSF1-210ENST00000532935 SMIM3Q9BZL3 60 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 ZNF586Q9NXT0 402 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 CELA1Q9UNI1 258 aa11.06□□□□□ -0.64
CPSF1-210ENST00000532935 CRXO43186 299 aaPredicted RBP11.05□□□□□ -0.64
CPSF1-210ENST00000532935 IFNA5P01569 189 aa11.05□□□□□ -0.64
CPSF1-210ENST00000532935 RHOBP62745 196 aa11.05□□□□□ -0.64
CPSF1-210ENST00000532935 SLC25A2Q9BXI2 301 aa11.05□□□□□ -0.64
CPSF1-210ENST00000532935 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
CPSF1-210ENST00000532935 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
CPSF1-210ENST00000532935 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 C11orf94C9JXX5 98 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 PRAC2D3DTV9 90 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 ZNF253O75346 499 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 INSP01308 110 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 NMBP08949 121 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 PYYP10082 97 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 HIST1H1EP10412 219 aaKnown RBP11.04□□□□□ -0.64
CPSF1-210ENST00000532935 SULT1A2P50226 295 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 PPP1R14DQ9NXH3 145 aa11.04□□□□□ -0.64
CPSF1-210ENST00000532935 VPS13DQ5THJ4 4388 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 UMAD1C9J7I0 102 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 HBE1P02100 147 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 S100A1P23297 94 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 EMP1P54849 157 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 Q6ZTC4 211 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 OR10J6PQ8NGY7 276 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 C2CD4CQ8TF44 421 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 LINC00476Q8WZB0 136 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 FAM167A-AS1Q96KT0 104 aa11.03□□□□□ -0.64
CPSF1-210ENST00000532935 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
CPSF1-210ENST00000532935 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 LOC102723971A0A1B0GUV8 181 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 NDUFB4O95168 129 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 BLOC1S1P78537 153 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 PDE6HQ13956 83 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 RRN3P1Q2M238 152 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 C12orf74Q32Q52 190 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 FFAR4Q5NUL3 377 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 BLNKQ8WV28 456 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 TMED6Q8WW62 240 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
CPSF1-210ENST00000532935 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 TIMM9Q9Y5J7 89 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 KMT2AQ03164 3969 aa11.02□□□□□ -0.65
CPSF1-210ENST00000532935 TRAV10A0A0B4J240 114 aa11.01□□□□□ -0.65
CPSF1-210ENST00000532935 SERF2P84101 59 aa11.01□□□□□ -0.65
CPSF1-210ENST00000532935 DPPA3Q6W0C5 159 aa11.01□□□□□ -0.65
CPSF1-210ENST00000532935 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
CPSF1-210ENST00000532935 OR51M1Q9H341 326 aa11.01□□□□□ -0.65
CPSF1-210ENST00000532935 LY6G6CO95867 125 aa11□□□□□ -0.65
CPSF1-210ENST00000532935 SPART-AS1P0CW21 52 aa11□□□□□ -0.65
CPSF1-210ENST00000532935 CDKN1BP46527 198 aa11□□□□□ -0.65
CPSF1-210ENST00000532935 SLC7A5P1Q8MH63 180 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms