RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 USP54Q70EL1 1684 aa-0.11□□□□□ -2.43
PATL1-202ENST00000531919 HRNRQ86YZ3 2850 aaPredicted RBP-0.12□□□□□ -2.43
PATL1-202ENST00000531919 KIAA1549LQ6ZVL6 1849 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 TRAV5A0A0B4J249 113 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 A0A0J9YY99 117 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 A6NN06 94 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 REEP5Q00765 189 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 PHF5AQ7RTV0 110 aaKnown RBP-0.12□□□□□ -2.43
PATL1-202ENST00000531919 Q86TA4 180 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 PXT1Q8NFP0 134 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 PAIP2Q9BPZ3 127 aaKnown RBP-0.12□□□□□ -2.43
PATL1-202ENST00000531919 TAF9BQ9HBM6 251 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 RNF11Q9Y3C5 154 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 ANKRD31Q8N7Z5 1873 aa-0.12□□□□□ -2.43
PATL1-202ENST00000531919 NSD1Q96L73 2696 aaPredicted RBP-0.12□□□□□ -2.43
PATL1-202ENST00000531919 TMEM210A6NLX4 147 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 G3V2T6 193 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 RER1O15258 196 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 HIST1H2BKO60814 126 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 NDUFC2O95298 119 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 CSN2P05814 226 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 HIST1H2BJP06899 126 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 LINC00299Q6ZSB3 139 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 PRR15Q8IV56 129 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 RMND5BQ96G75 393 aaPredicted RBP-0.13□□□□□ -2.43
PATL1-202ENST00000531919 ZNF714Q96N38 554 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 SH3BGRL3Q9H299 93 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 TCEAL2Q9H3H9 227 aaPredicted RBP-0.13□□□□□ -2.43
PATL1-202ENST00000531919 SS18L2Q9UHA2 77 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 MYH3P11055 1940 aa-0.13□□□□□ -2.43
PATL1-202ENST00000531919 RTL9Q8NET4 1388 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 MFSD11O43934 449 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 ATG12O94817 140 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 LY6G6CO95867 125 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 S100A6P06703 90 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 C1orf140Q5VVS0 124 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 CARD19Q96LW7 228 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 MAP1LC3BQ9GZQ8 125 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 LYRM2Q9NU23 88 aaPredicted RBP-0.14□□□□□ -2.43
PATL1-202ENST00000531919 IGF2RP11717 2491 aa-0.14□□□□□ -2.43
PATL1-202ENST00000531919 FLNCQ14315 2725 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 ANK2Q01484 3957 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 ANK1P16157 1881 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 RIIAD1A6NNX1 92 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 H7C1C5 153 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 PIAS1O75925 651 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 IFNA4P05014 189 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 OGNP20774 298 aaKnown RBP-0.15□□□□□ -2.43
PATL1-202ENST00000531919 KDELR1P24390 212 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 PHBP35232 272 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 LCN6P62502 163 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 C10orf99Q6UWK7 81 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 SPINK6Q6UWN8 80 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 FAM216BQ8N7L0 139 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 CCL4L1Q8NHW4 92 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 MALSU1Q96EH3 234 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 PHB2Q99623 299 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 GINS3Q9BRX5 216 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 CST11Q9H112 138 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 KIAA1107Q9UPP5 1409 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 OTOGQ6ZRI0 2925 aa-0.15□□□□□ -2.43
PATL1-202ENST00000531919 DSTQ03001 7570 aaKnown RBP-0.15□□□□□ -2.43
PATL1-202ENST00000531919 AIPO00170 330 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 E2F6O75461 281 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 IFNA14P01570 189 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 FXYD6P3P58550 94 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 HBBP68871 147 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 QRFPP83859 136 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 SNCBQ16143 134 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 SCGB2B2Q4G0G5 96 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 FKBP1CQ5VVH2 108 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 C10orf111Q8N326 155 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 MNS1Q8NEH6 495 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 RTL8AQ9BWD3 113 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 LPAR5Q9H1C0 372 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 HIVEP3Q5T1R4 2406 aa-0.16□□□□□ -2.44
PATL1-202ENST00000531919 TPRP12270 2363 aaKnown RBP-0.17□□□□□ -2.44
PATL1-202ENST00000531919 A0A096LPI6 279 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 CST7O76096 145 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 IGHV3-30P01768 117 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 IGHV3-30-5P0DP03 117 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 DIAPH2-AS1Q14236 149 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 AKR1C8PQ5T2L2 129 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 HACD4Q5VWC8 232 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 NUP35Q8NFH5 326 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 OR2H1Q9GZK4 316 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 BOKQ9UMX3 212 aaPredicted RBP-0.17□□□□□ -2.44
PATL1-202ENST00000531919 SSR3Q9UNL2 185 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 KDM6BO15054 1643 aa-0.17□□□□□ -2.44
PATL1-202ENST00000531919 EIF3AQ14152 1382 aaKnown RBP-0.18□□□□□ -2.44
PATL1-202ENST00000531919 PIEZO1Q92508 2521 aa-0.18□□□□□ -2.44
PATL1-202ENST00000531919 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.18□□□□□ -2.44
PATL1-202ENST00000531919 LYRM1O43325 122 aa-0.18□□□□□ -2.44
PATL1-202ENST00000531919 RPL35P42766 123 aaKnown RBP-0.18□□□□□ -2.44
PATL1-202ENST00000531919 RPL37P61927 97 aaKnown RBP-0.18□□□□□ -2.44
PATL1-202ENST00000531919 ARF6P62330 175 aa-0.18□□□□□ -2.44
PATL1-202ENST00000531919 TMED2Q15363 201 aa-0.18□□□□□ -2.44
PATL1-202ENST00000531919 LTC4SQ16873 150 aa-0.18□□□□□ -2.44
PATL1-202ENST00000531919 GLYATL3Q5SZD4 288 aa-0.18□□□□□ -2.44
PATL1-202ENST00000531919 IFT20Q8IY31 132 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms