RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.42
USF1-210ENST00000531842 FAM240BA0A1B0GVZ2 78 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 CBY3A6NI87 242 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 A8MTW9 85 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 H3BRN7 92 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 J3QL48 77 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 K7EPK0 472 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 SCGB1D2O95969 90 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 LINC00869P0C866 280 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 TSPOP30536 169 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 TAS2R30P59541 319 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 TAS2R60P59551 318 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 RRAS2P62070 204 aaPredicted RBP6.15□□□□□ -1.42
USF1-210ENST00000531842 SELENOTP62341 195 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 ZNF846Q147U1 533 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 PSG3Q16557 428 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 TMEM256Q8N2U0 113 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 OR8A1Q8NGG7 326 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 GNPNAT1Q96EK6 184 aaPredicted RBP6.15□□□□□ -1.42
USF1-210ENST00000531842 ARL6Q9H0F7 186 aa6.15□□□□□ -1.42
USF1-210ENST00000531842 IGSF23A1L1A6 192 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 FAM24AA6NFZ4 105 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 H0YIZ8 118 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 MRPS12O15235 138 aaKnown RBP6.14□□□□□ -1.43
USF1-210ENST00000531842 TSC22D2O75157 780 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 SIX6O95475 246 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 SNRPCP09234 159 aaKnown RBP6.14□□□□□ -1.43
USF1-210ENST00000531842 CXCL3P19876 107 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 TTC32Q5I0X7 151 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 OR10P1Q8NGE3 313 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 RPUSD4Q96CM3 377 aaKnown RBP6.14□□□□□ -1.43
USF1-210ENST00000531842 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 C2orf50Q96LR7 162 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 MGAT4CQ9UBM8 478 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
USF1-210ENST00000531842 TIMM8BQ9Y5J9 83 aaPredicted RBP6.14□□□□□ -1.43
USF1-210ENST00000531842 GAGE12BA1L429 117 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 FAM25EA8MYX2 175 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 GOSR2O14653 212 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 GAGE7O76087 117 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 CDKN1BP46527 198 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 H2BFSP57053 126 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 PLP1P60201 277 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 SLC38A11Q08AI6 406 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 RAB32Q13637 225 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 MORN5Q5VZ52 161 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 ZNF493Q6ZR52 646 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 CCDC28AQ8IWP9 274 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 OR10J6PQ8NGY7 276 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 RXFP4Q8TDU9 374 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 MGST2Q99735 147 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 MARVELD1Q9BSK0 173 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 ARV1Q9H2C2 271 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 NPVFQ9HCQ7 196 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 MRPS16Q9Y3D3 137 aaKnown RBP6.13□□□□□ -1.43
USF1-210ENST00000531842 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
USF1-210ENST00000531842 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
USF1-210ENST00000531842 A0A087X0K7 114 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 C5orf51A6NDU8 294 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 FNDC10F2Z333 226 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 H7BYZ3 331 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 COX7A2P2O60397 106 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 CST7O76096 145 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 ICAM4Q14773 271 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 VWC2Q2TAL6 325 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 MZT2BQ6NZ67 158 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 TEPPQ6URK8 271 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 LINC00305Q7Z4B0 112 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 TMEM37Q8WXS4 190 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 VSIG2Q96IQ7 327 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 UPK3BQ9BT76 320 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 TMPRSS5Q9H3S3 457 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 BATF3Q9NR55 127 aa6.12□□□□□ -1.43
USF1-210ENST00000531842 A0A087WTM6 91 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 A0A096LPF7 62 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 INMT-MINDY4F8WBC2 141 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 H3BTX0 84 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 J3KRW8 73 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 AGPAT2O15120 278 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 CXCL2P19875 107 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 M6PRP20645 277 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 PXDC1Q5TGL8 231 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 LCN15Q6UWW0 184 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 ZNF546Q86UE3 836 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 BPIFA4PQ86YQ2 179 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 TMEM252Q8N6L7 170 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 ENKURQ8TC29 256 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 RNASE8Q8TDE3 154 aaKnown RBP6.11□□□□□ -1.43
USF1-210ENST00000531842 TMEM263Q8WUH6 116 aaKnown RBP6.11□□□□□ -1.43
USF1-210ENST00000531842 LYRM2Q9NU23 88 aaPredicted RBP6.11□□□□□ -1.43
USF1-210ENST00000531842 PGPEP1Q9NXJ5 209 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 OR5AC2Q9NZP5 309 aa6.11□□□□□ -1.43
USF1-210ENST00000531842 A0A1W2PPQ1 181 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 SNURFLB1AK76 121 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 PRAC2D3DTV9 90 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 L7N2F9 121 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 RLN2P04090 185 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms