RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 DEFB113Q30KQ7 82 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 GLYATL3Q5SZD4 288 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 HAGHLQ6PII5 290 aaPredicted RBP1.87□□□□□ -2.11
USP47-211ENST00000531513 OR4C6Q8NH72 309 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 TMEM203Q969S6 136 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 ZC2HC1AQ96GY0 325 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 Q96M85 177 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 TP53RKQ96S44 253 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 KIAA1107Q9UPP5 1409 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 FRMPD1Q5SYB0 1578 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 BICRAQ9NZM4 1560 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 RGS12O14924 1447 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 N4BP2Q86UW6 1770 aaPredicted RBP1.86□□□□□ -2.11
USP47-211ENST00000531513 TRAV14DV4A0A0A6YYC5 116 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 K7ERU9 68 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 DLEU1O43261 78 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 SAA1P0DJI8 122 aaPredicted RBP1.86□□□□□ -2.11
USP47-211ENST00000531513 BRS3P32247 399 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 ROMO1P60602 79 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 COPZ1P61923 177 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 RRAS2P62070 204 aaPredicted RBP1.86□□□□□ -2.11
USP47-211ENST00000531513 CDK5R1Q15078 307 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 C10orf55Q5SWW7 151 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 CTAGE3PQ8IX95 158 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 OR10AC1Q8NH08 325 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 SFT2D1Q8WV19 159 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 ARL11Q969Q4 196 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 BANF2Q9H503 90 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 MDC1Q14676 2089 aaKnown RBP1.86□□□□□ -2.11
USP47-211ENST00000531513 BAHCC1Q9P281 2608 aa1.86□□□□□ -2.11
USP47-211ENST00000531513 KDM6AO15550 1401 aaPredicted RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 SMG6Q86US8 1419 aaKnown RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 TRGV2A0A075B6R0 118 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 A0A1B0GV90 55 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 HBDP02042 147 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 FABP4P15090 132 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 HIST1H1BP16401 226 aaKnown RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 KDELR1P24390 212 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 FOXA3P55318 350 aaPredicted RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 EMX2Q04743 252 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 KRTAP13-1Q8IUC0 172 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 OR5D14Q8NGL3 314 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 OR2T35Q8NGX2 323 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 POP5Q969H6 163 aaKnown RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 LINC00470Q9BZP3 86 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 TPRKBQ9Y3C4 175 aa1.85□□□□□ -2.11
USP47-211ENST00000531513 TCOF1Q13428 1488 aaKnown RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 COL5A3P25940 1745 aaPredicted RBP1.85□□□□□ -2.11
USP47-211ENST00000531513 LOC107986453A0A1B0GWG9 222 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 ZNF727A8MUV8 499 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 LINC00587B1AMM8 73 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 YPEL1O60688 119 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 TCRAP04437 139 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 IGLC6P0CF74 106 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 HLA-DRB4P13762 266 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 AKR1D1P51857 326 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 ASB16-AS1Q495Z4 193 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 CCL4L1Q8NHW4 92 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 TMEM254Q8TBM7 123 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 ZNF625Q96I27 306 aaPredicted RBP1.84□□□□□ -2.11
USP47-211ENST00000531513 HYLS1Q96M11 299 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 LPAR5Q9H1C0 372 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 SOX21Q9Y651 276 aaPredicted RBP1.84□□□□□ -2.11
USP47-211ENST00000531513 HLA-DRB4X5D2U9 266 aa1.84□□□□□ -2.11
USP47-211ENST00000531513 VIRMAQ69YN4 1812 aaKnown RBP1.84□□□□□ -2.12
USP47-211ENST00000531513 GBF1Q92538 1859 aa1.84□□□□□ -2.12
USP47-211ENST00000531513 PRG4Q92954 1404 aaPredicted RBP1.83□□□□□ -2.12
USP47-211ENST00000531513 DLC1Q96QB1 1528 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 TRAV27A0A087WT01 109 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 IGKV2D-26A0A0A0MRZ7 120 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 PNMA8CA0A1B0GUJ8 204 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 hDV103S1A0JD37 113 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 FAM25AB3EWG3 89 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 FAM25CB3EWG5 89 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 FAM25GB3EWG6 89 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 B4DSR2 109 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 M0R233 179 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 NPFFO15130 113 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 IFNGP01579 166 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 IGLV1-51P01701 117 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
USP47-211ENST00000531513 RNASE3P12724 160 aaKnown RBP1.83□□□□□ -2.12
USP47-211ENST00000531513 S100PP25815 95 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 ZNF93P35789 620 aaPredicted RBP1.83□□□□□ -2.12
USP47-211ENST00000531513 DSCR4P56555 118 aaPredicted RBP1.83□□□□□ -2.12
USP47-211ENST00000531513 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 CDK6Q00534 326 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 TMEM91Q6ZNR0 172 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 TEN1Q86WV5 123 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 MUCL1Q96DR8 90 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 OR4C12Q96R67 309 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 TMEM191AQ9H0A3 160 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 TAF9BQ9HBM6 251 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 TNFSF18Q9UNG2 199 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 FAM135BQ49AJ0 1406 aa1.83□□□□□ -2.12
USP47-211ENST00000531513 NUP210Q8TEM1 1887 aaPredicted RBP1.82□□□□□ -2.12
USP47-211ENST00000531513 KDM5CP41229 1560 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms