RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 SLC50A1Q9BRV3 221 aa10.66□□□□□ -0.7
CPSF1-206ENST00000531480 ZNF331Q9NQX6 463 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-206ENST00000531480 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
CPSF1-206ENST00000531480 A8MTW9 85 aa10.65□□□□□ -0.7
CPSF1-206ENST00000531480 HMGB3O15347 200 aaKnown RBP10.65□□□□□ -0.7
CPSF1-206ENST00000531480 HIST1H1EP10412 219 aaKnown RBP10.65□□□□□ -0.7
CPSF1-206ENST00000531480 PDE6HQ13956 83 aa10.65□□□□□ -0.7
CPSF1-206ENST00000531480 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
CPSF1-206ENST00000531480 C16orf92Q96LL3 132 aa10.65□□□□□ -0.7
CPSF1-206ENST00000531480 ZNF586Q9NXT0 402 aa10.65□□□□□ -0.7
CPSF1-206ENST00000531480 H3BMM0 161 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 SLC17A3O00476 420 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 OR7C2O60412 319 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 HLA-DRB4P13762 266 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 FHITP49789 147 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 FOXI2Q6ZQN5 318 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 FXYD5Q96DB9 178 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 FAM210AQ96ND0 272 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 TCEAL7Q9BRU2 100 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 SAV1Q9H4B6 383 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-206ENST00000531480 CLEC5AQ9NY25 188 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 HLA-DRB4X5D2U9 266 aa10.64□□□□□ -0.71
CPSF1-206ENST00000531480 STAB2Q8WWQ8 2551 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 RBFOX3A6NFN3 312 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 KNCNA6PVL3 124 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 KRBOX1C9JBD0 128 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 UBE2CO00762 179 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 NDUFB4O95168 129 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 PYYP10082 97 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 APOC4P55056 127 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 PAXXQ9BUH6 204 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 OR51M1Q9H341 326 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 TREM1Q9NP99 234 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
CPSF1-206ENST00000531480 HUWE1Q7Z6Z7 4374 aaKnown RBP10.63□□□□□ -0.71
CPSF1-206ENST00000531480 A0A0J9YX75 114 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 F6UZH7 168 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 PDE6DO43924 150 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-206ENST00000531480 PSG3Q16557 428 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 ACTL10Q5JWF8 245 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 STHQ8IWL8 128 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 RNF182Q8N6D2 247 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 ASCL2Q99929 193 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
CPSF1-206ENST00000531480 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 ARL14EPLP0DKL9 152 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 GCHFRP30047 84 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 Q6ZWC4 215 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
CPSF1-206ENST00000531480 MRPL53Q96EL3 112 aaKnown RBP10.61□□□□□ -0.71
CPSF1-206ENST00000531480 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 CSTL1Q9H114 145 aa10.61□□□□□ -0.71
CPSF1-206ENST00000531480 A0A1W2PRE2 83 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 SNRPCP09234 159 aaKnown RBP10.6□□□□□ -0.71
CPSF1-206ENST00000531480 BCL2P10415 239 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
CPSF1-206ENST00000531480 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 DEFB1P60022 68 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 UBE2L3P68036 154 aaKnown RBP10.6□□□□□ -0.71
CPSF1-206ENST00000531480 ZNF726P1Q15940 193 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 MORN3Q6PF18 240 aaPredicted RBP10.6□□□□□ -0.71
CPSF1-206ENST00000531480 LYPD1Q8N2G4 141 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 PCNPQ8WW12 178 aaKnown RBP10.6□□□□□ -0.71
CPSF1-206ENST00000531480 TP53TG1Q9Y2A0 90 aa10.6□□□□□ -0.71
CPSF1-206ENST00000531480 A0A1B0GV50 99 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 F6UB75 175 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 H3BTX0 84 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 FGF8P55075 233 aaPredicted RBP10.59□□□□□ -0.71
CPSF1-206ENST00000531480 PSG9Q00887 426 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 CST9LP1Q5W188 147 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 SSX7Q7RTT5 188 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 SLC7A5P1Q8MH63 180 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 SLC35B3Q9H1N7 401 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 ZMAT4Q9H898 229 aa10.59□□□□□ -0.71
CPSF1-206ENST00000531480 OR10J4P0C629 311 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 MEF2BQ02080 365 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-206ENST00000531480 FAM74A3Q4VXF1 159 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 TOR2AQ5JU69 321 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 EBLN2Q6P2I7 272 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 OR8A1Q8NGG7 326 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 OVOL2Q9BRP0 275 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 PRELID1Q9Y255 219 aa10.58□□□□□ -0.72
CPSF1-206ENST00000531480 LOC102723971A0A1B0GUV8 181 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 TMEM250H0YL14 139 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 K7EQM0 130 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 EIF3GO75821 320 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF1-206ENST00000531480 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
CPSF1-206ENST00000531480 S100A9P06702 114 aaKnown RBP10.57□□□□□ -0.72
CPSF1-206ENST00000531480 CSNK1G2-AS1Q8NCQ2 148 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 BLNKQ8WV28 456 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 RNF183Q96D59 192 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms