RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 STAG3L2P0CL84 134 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 STAG3L3P0CL85 134 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 C4BPBP20851 252 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 HIST1H1AQ02539 215 aaPredicted RBP10.15□□□□□ -0.78
SMPD1-206ENST00000531336 ZNF726P1Q15940 193 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 MORN3Q6PF18 240 aaPredicted RBP10.15□□□□□ -0.78
SMPD1-206ENST00000531336 IQCF2Q8IXL9 164 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 EXOC3-AS1Q8N2X6 119 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 CLEC5AQ9NY25 188 aa10.15□□□□□ -0.78
SMPD1-206ENST00000531336 M0R3E3 92 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 UBE2CO00762 179 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
SMPD1-206ENST00000531336 GCHFRP30047 84 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 CNN1P51911 297 aaKnown RBP10.14□□□□□ -0.79
SMPD1-206ENST00000531336 FXYD7P58549 80 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 ICAM4Q14773 271 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 SLC51BQ86UW2 128 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 OR8A1Q8NGG7 326 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 RCHY1Q96PM5 261 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 PLA2G2EQ9NZK7 142 aa10.14□□□□□ -0.79
SMPD1-206ENST00000531336 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
SMPD1-206ENST00000531336 CXorf1O96002 111 aa10.13□□□□□ -0.79
SMPD1-206ENST00000531336 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
SMPD1-206ENST00000531336 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
SMPD1-206ENST00000531336 MRPL53Q96EL3 112 aaKnown RBP10.13□□□□□ -0.79
SMPD1-206ENST00000531336 Q9H3A6 140 aa10.13□□□□□ -0.79
SMPD1-206ENST00000531336 PRELID1Q9Y255 219 aa10.13□□□□□ -0.79
SMPD1-206ENST00000531336 U3KQK5 164 aa10.13□□□□□ -0.79
SMPD1-206ENST00000531336 MAP1LC3B2A6NCE7 125 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 UMAD1C9J7I0 102 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 GIG44P09565 113 aaPredicted RBP10.12□□□□□ -0.79
SMPD1-206ENST00000531336 FHITP49789 147 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 FGF8P55075 233 aaPredicted RBP10.12□□□□□ -0.79
SMPD1-206ENST00000531336 NUTF2P61970 127 aaKnown RBP10.12□□□□□ -0.79
SMPD1-206ENST00000531336 Q6ZWC4 215 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 OR10J6PQ8NGY7 276 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 MAP1LC3BQ9GZQ8 125 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 SLC35B3Q9H1N7 401 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 XCL2Q9UBD3 114 aa10.12□□□□□ -0.79
SMPD1-206ENST00000531336 COL7A1Q02388 2944 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 A8MTW9 85 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 SPRY2O43597 315 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
SMPD1-206ENST00000531336 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 CLUHP3Q96NS8 147 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 OVOL2Q9BRP0 275 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 OTORQ9NRC9 128 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 TMEM167BQ9NRX6 74 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 PPP1R14DQ9NXH3 145 aa10.11□□□□□ -0.79
SMPD1-206ENST00000531336 IGKV2-40A0A087WW87 121 aaPredicted RBP10.1□□□□□ -0.79
SMPD1-206ENST00000531336 BOLA2-SMG1P6H3BVE0 249 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 M0R2Z0 102 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 IGKV2D-40P01614 121 aaPredicted RBP10.1□□□□□ -0.79
SMPD1-206ENST00000531336 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 AMTNQ6UX39 209 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 DPPA3Q6W0C5 159 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 RNF183Q96D59 192 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 TMPRSS5Q9H3S3 457 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
SMPD1-206ENST00000531336 A0A1B0GV50 99 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 PGPA6NDG6 321 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 CSN1S1P47710 185 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 ERCC8Q13216 396 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 FAM74A1Q5RGS3 127 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 C1QTNF4Q9BXJ3 329 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 TGP01266 2768 aa10.09□□□□□ -0.79
SMPD1-206ENST00000531336 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
SMPD1-206ENST00000531336 UBE2G2P60604 165 aa10.08□□□□□ -0.8
SMPD1-206ENST00000531336 CMTM2Q8TAZ6 248 aa10.08□□□□□ -0.8
SMPD1-206ENST00000531336 SFT2D1Q8WV19 159 aa10.08□□□□□ -0.8
SMPD1-206ENST00000531336 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
SMPD1-206ENST00000531336 SULT1A2P50226 295 aa10.07□□□□□ -0.8
SMPD1-206ENST00000531336 RAB5CP51148 216 aa10.07□□□□□ -0.8
SMPD1-206ENST00000531336 GNG5P63218 68 aa10.07□□□□□ -0.8
SMPD1-206ENST00000531336 OR11H2Q8NH07 326 aa10.07□□□□□ -0.8
SMPD1-206ENST00000531336 TENM3Q9P273 2699 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 IGHV3OR16-12A0A075B7B8 117 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 GGTLC3B5MD39 225 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 DIRC3C9JPN6 131 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 J3KRW8 73 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 AMBPP02760 352 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 H2AFB1P0C5Y9 115 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 CT45A10P0DMU9 189 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 ALKAL2Q6UX46 152 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 CSNK1G2-AS1Q8NCQ2 148 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 RXFP4Q8TDU9 374 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 MBD3L1Q8WWY6 194 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 RARRES2Q99969 163 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 VGLL1Q99990 258 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 AGPAT4-IT1Q9H0P7 198 aa10.06□□□□□ -0.8
SMPD1-206ENST00000531336 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
SMPD1-206ENST00000531336 INSP01308 110 aa10.05□□□□□ -0.8
SMPD1-206ENST00000531336 LEPP41159 167 aa10.05□□□□□ -0.8
SMPD1-206ENST00000531336 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms