RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CST7O76096 145 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 NUDT3O95989 172 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 CAV2P51636 162 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 IFITM3Q01628 133 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 RAB31Q13636 194 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 Q6ZRG5 221 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 NRARPQ7Z6K4 114 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 OR10J6PQ8NGY7 276 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 ZNF431Q8TF32 576 aaPredicted RBP11.06□□□□□ -0.64
CPSF1-205ENST00000531042 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
CPSF1-205ENST00000531042 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
CPSF1-205ENST00000531042 PXMP4Q9Y6I8 212 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 C5orf51A6NDU8 294 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 FAM24AA6NFZ4 105 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 PTTG1O95997 202 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 DEFA1P59665 94 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 DEFA3P59666 94 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 C2orf50Q96LR7 162 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 SEC22CQ9BRL7 303 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
CPSF1-205ENST00000531042 NUDT15Q9NV35 164 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
CPSF1-205ENST00000531042 TRAV5A0A0B4J249 113 aa11.04□□□□□ -0.64
CPSF1-205ENST00000531042 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
CPSF1-205ENST00000531042 GFI1BQ5VTD9 330 aa11.04□□□□□ -0.64
CPSF1-205ENST00000531042 C12orf45Q8N5I9 185 aaPredicted RBP11.04□□□□□ -0.64
CPSF1-205ENST00000531042 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
CPSF1-205ENST00000531042 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
CPSF1-205ENST00000531042 UQCC1Q9NVA1 299 aa11.04□□□□□ -0.64
CPSF1-205ENST00000531042 PVALBP20472 110 aaPredicted RBP11.03□□□□□ -0.64
CPSF1-205ENST00000531042 RPL29P47914 159 aaKnown RBP11.03□□□□□ -0.64
CPSF1-205ENST00000531042 CCL18P55774 89 aa11.03□□□□□ -0.64
CPSF1-205ENST00000531042 GUK1Q16774 197 aa11.03□□□□□ -0.64
CPSF1-205ENST00000531042 CCDC28AQ8IWP9 274 aa11.03□□□□□ -0.64
CPSF1-205ENST00000531042 LINC00612Q8N6U2 182 aa11.03□□□□□ -0.64
CPSF1-205ENST00000531042 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
CPSF1-205ENST00000531042 PFDN5Q99471 154 aa11.03□□□□□ -0.64
CPSF1-205ENST00000531042 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 H2AFB2P0C5Z0 115 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 CT45A10P0DMU9 189 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 S100A11P31949 105 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 SULT1A1P50225 295 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 IL15RAQ13261 267 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 ODF3Q96PU9 254 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
CPSF1-205ENST00000531042 SLC39A9Q9NUM3 307 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 LINC00588Q9Y4M8 146 aa11.02□□□□□ -0.65
CPSF1-205ENST00000531042 UBE2L5PA0A1B0GUS4 154 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 ZNF253O75346 499 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 S100A10P60903 97 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 BAXQ07812 192 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 TMEM252Q8N6L7 170 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 RYR1P21817 5038 aa11.01□□□□□ -0.65
CPSF1-205ENST00000531042 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 J3KRW8 73 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 LEPP41159 167 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 OR5I1Q13606 314 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 RAB32Q13637 225 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 CLINT1Q14677 625 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 STX12Q86Y82 276 aa11□□□□□ -0.65
CPSF1-205ENST00000531042 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 SNURFLB1AK76 121 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 GAGE7O76087 117 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 RLN2P04090 185 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 HBG1P69891 147 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 HBG2P69892 147 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 TNP2Q05952 138 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 ASAH1Q13510 395 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 ATP6V1FQ16864 119 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 SSX7Q7RTT5 188 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
CPSF1-205ENST00000531042 MRPL53Q96EL3 112 aaKnown RBP10.99□□□□□ -0.65
CPSF1-205ENST00000531042 PYGO2Q9BRQ0 406 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 TMEM14CQ9P0S9 112 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 MUC4Q99102 2169 aa10.99□□□□□ -0.65
CPSF1-205ENST00000531042 hCG_2014768A0A024R1R8 64 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 FAM240BA0A1B0GVZ2 78 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 M0R3E3 92 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 PFDN1O60925 122 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 M6PRP20645 277 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 HOXA5P20719 270 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 FGF7P21781 194 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 RXFP4Q8TDU9 374 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 ZNF503Q96F45 646 aa10.98□□□□□ -0.65
CPSF1-205ENST00000531042 MPDU1O75352 247 aa10.97□□□□□ -0.65
CPSF1-205ENST00000531042 NDUFB4O95168 129 aa10.97□□□□□ -0.65
CPSF1-205ENST00000531042 HIST1H1EP10412 219 aaKnown RBP10.97□□□□□ -0.65
CPSF1-205ENST00000531042 DAZ2Q13117 558 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms