RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 U3KQK5 164 aa11.23□□□□□ -0.61
CCS-206ENST00000530961 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 F6UB75 175 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 NDUFB4O95168 129 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 STAG3L2P0CL84 134 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 STAG3L3P0CL85 134 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 DEFB1P60022 68 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 CD300CQ08708 224 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
CCS-206ENST00000530961 DNAH9Q9NYC9 4486 aa11.21□□□□□ -0.61
CCS-206ENST00000530961 CA1P00915 261 aaPredicted RBP11.21□□□□□ -0.61
CCS-206ENST00000530961 EIF5AL1Q6IS14 154 aaKnown RBP11.21□□□□□ -0.61
CCS-206ENST00000530961 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
CCS-206ENST00000530961 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.61
CCS-206ENST00000530961 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
CCS-206ENST00000530961 CTXND1A0A1B0GTU2 59 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 A8MTW9 85 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 C3orf84H3BNL1 204 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 HMGB3O15347 200 aaKnown RBP11.2□□□□□ -0.62
CCS-206ENST00000530961 SPRY2O43597 315 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 CXorf1O96002 111 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 CNN1P51911 297 aaKnown RBP11.2□□□□□ -0.62
CCS-206ENST00000530961 RANP62826 216 aaKnown RBP11.2□□□□□ -0.62
CCS-206ENST00000530961 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 RNF183Q96D59 192 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 RCHY1Q96PM5 261 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 TMEM167BQ9NRX6 74 aa11.2□□□□□ -0.62
CCS-206ENST00000530961 ZNF705FA8MVS1 300 aaPredicted RBP11.19□□□□□ -0.62
CCS-206ENST00000530961 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCS-206ENST00000530961 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
CCS-206ENST00000530961 ARL14EPLP0DKL9 152 aa11.19□□□□□ -0.62
CCS-206ENST00000530961 HIST1H1AQ02539 215 aaPredicted RBP11.19□□□□□ -0.62
CCS-206ENST00000530961 ICAM4Q14773 271 aa11.19□□□□□ -0.62
CCS-206ENST00000530961 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
CCS-206ENST00000530961 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
CCS-206ENST00000530961 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 GCHFRP30047 84 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 CSN1S1P47710 185 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 DEFB135Q30KP9 77 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 FAM74A1Q5RGS3 127 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 DPPA3Q6W0C5 159 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 PHYHIPLQ96FC7 376 aa11.18□□□□□ -0.62
CCS-206ENST00000530961 M0R3E3 92 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 AMBPP02760 352 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
CCS-206ENST00000530961 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
CCS-206ENST00000530961 RAB5CP51148 216 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 ARL6IP6Q8N6S5 226 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 TMED6Q8WW62 240 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 Q9H3A6 140 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 RETNQ9HD89 108 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 RYR1P21817 5038 aa11.17□□□□□ -0.62
CCS-206ENST00000530961 PRAC2D3DTV9 90 aa11.16□□□□□ -0.62
CCS-206ENST00000530961 SSX7Q7RTT5 188 aa11.16□□□□□ -0.62
CCS-206ENST00000530961 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
CCS-206ENST00000530961 XCL2Q9UBD3 114 aa11.16□□□□□ -0.62
CCS-206ENST00000530961 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 PGPA6NDG6 321 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 CSNK1G2-AS1Q8NCQ2 148 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 RARRES2Q99969 163 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
CCS-206ENST00000530961 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
CCS-206ENST00000530961 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 BOLA2-SMG1P6H3BVE0 249 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 TSPOP30536 169 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 FHITP49789 147 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 CMTM2Q8TAZ6 248 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 FAM213BQ8TBF2 198 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
CCS-206ENST00000530961 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
CCS-206ENST00000530961 RBAKDNA6NC62 111 aa11.13□□□□□ -0.63
CCS-206ENST00000530961 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
CCS-206ENST00000530961 FXYD7P58549 80 aa11.13□□□□□ -0.63
CCS-206ENST00000530961 C9orf47Q6ZRZ4 202 aa11.13□□□□□ -0.63
CCS-206ENST00000530961 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
CCS-206ENST00000530961 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
CCS-206ENST00000530961 NKX6-2Q9C056 277 aaPredicted RBP11.13□□□□□ -0.63
CCS-206ENST00000530961 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
CCS-206ENST00000530961 DIRC3C9JPN6 131 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
CCS-206ENST00000530961 CDKN1BP46527 198 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 SULT1A2P50226 295 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 NKX2-5P52952 324 aaPredicted RBP11.12□□□□□ -0.63
CCS-206ENST00000530961 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms