RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 OTORQ9NRC9 128 aa7.96□□□□□ -1.13
SOX6-213ENST00000530378 IGKV2-40A0A087WW87 121 aaPredicted RBP7.96□□□□□ -1.14
SOX6-213ENST00000530378 A0A1W2PRE2 83 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 OR4C46A6NHA9 309 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 C9JQL5 133 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 IGKV2D-40P01614 121 aaPredicted RBP7.96□□□□□ -1.14
SOX6-213ENST00000530378 MEOX2P50222 304 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 PPT1P50897 306 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 CD81P60033 236 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 PRR31Q5SQ13 230 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 CMTM2Q8TAZ6 248 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 SPAG8Q99932 426 aaPredicted RBP7.96□□□□□ -1.14
SOX6-213ENST00000530378 MCRIP2Q9BUT9 160 aaKnown RBP7.96□□□□□ -1.14
SOX6-213ENST00000530378 TREM1Q9NP99 234 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 VAX2Q9UIW0 290 aa7.96□□□□□ -1.14
SOX6-213ENST00000530378 TRAV8-1A0A0A6YYK1 113 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 TRAV34A0A0B4J273 112 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 G3V4G9 280 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 ISLRO14498 428 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 CD7P09564 240 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 ID1P41134 155 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 DEFB131AP59861 70 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 PSG3Q16557 428 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 GOLT1AQ6ZVE7 132 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 APRG1Q8IVJ8 170 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 LINC00479Q96M42 142 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 DERL1Q9BUN8 251 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 MAP6D1Q9H9H5 199 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 ZNF256Q9Y2P7 627 aaPredicted RBP7.95□□□□□ -1.14
SOX6-213ENST00000530378 DNAH3Q8TD57 4116 aa7.95□□□□□ -1.14
SOX6-213ENST00000530378 TRAV25A0A0B4J276 109 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 LINC00862A6NCI5 91 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 ZNF253O75346 499 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 CD5P06127 495 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 SNRPD3P62318 126 aaKnown RBP7.94□□□□□ -1.14
SOX6-213ENST00000530378 ODF3L2Q3SX64 289 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 GDF5OSQ5U4N7 250 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 CYB561D1Q8N8Q1 229 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 C5orf17Q8NAS9 161 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 RPUSD4Q96CM3 377 aaKnown RBP7.94□□□□□ -1.14
SOX6-213ENST00000530378 PRR25Q96S07 402 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 KNCNA6PVL3 124 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 PEX7O00628 323 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 IGKV3-20P01619 116 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 INSL3P51460 131 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 HIST1H1AQ02539 215 aaPredicted RBP7.94□□□□□ -1.14
SOX6-213ENST00000530378 ERCC8Q13216 396 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 ZNF674Q2M3X9 581 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 Q8TAT8 98 aa7.94□□□□□ -1.14
SOX6-213ENST00000530378 J3QL48 77 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 TCRAP04437 139 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 CSN1S1P47710 185 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 LYPD1Q8N2G4 141 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 OR2K2Q8NGT1 345 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 VGLL1Q99990 258 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 MED9Q9NWA0 146 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 EPDR1Q9UM22 224 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 ARL2-SNX15V9GYD0 113 aa7.93□□□□□ -1.14
SOX6-213ENST00000530378 RAB19A4D1S5 217 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 DIRC3C9JPN6 131 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 SRP19P09132 144 aaKnown RBP7.92□□□□□ -1.14
SOX6-213ENST00000530378 AKR1C3P42330 323 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 KRTAP10-11P60412 298 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 ACTL10Q5JWF8 245 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 NHLRC2Q8NBF2 726 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 OR11H12B2RN74 326 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
SOX6-213ENST00000530378 SFTA3P0C7M3 94 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 PMS2P11Q13670 270 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 PEA15Q15121 130 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 ATG101Q9BSB4 218 aa7.92□□□□□ -1.14
SOX6-213ENST00000530378 PGPEP1LA6NFU8 196 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 J3KRW8 73 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 PDE6DO43924 150 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 RPL35P42766 123 aaKnown RBP7.91□□□□□ -1.14
SOX6-213ENST00000530378 BEAN1Q3B7T3 259 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 GTSCR1Q86UQ5 136 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 OR4B1Q8NGF8 309 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 C2CD4CQ8TF44 421 aa7.91□□□□□ -1.14
SOX6-213ENST00000530378 NKX6-2Q9C056 277 aaPredicted RBP7.91□□□□□ -1.14
SOX6-213ENST00000530378 AURKAIP1Q9NWT8 199 aaPredicted RBP7.91□□□□□ -1.14
SOX6-213ENST00000530378 TRAV2A0A0B4J234 112 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 F6UZH7 168 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 TAGLN2P37802 199 aaKnown RBP7.9□□□□□ -1.14
SOX6-213ENST00000530378 PRNTQ86SH4 94 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 DEFB125Q8N687 156 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 OR8A1Q8NGG7 326 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 GPR61Q9BZJ8 451 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 PARLQ9H300 379 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 PRELID1Q9Y255 219 aa7.9□□□□□ -1.14
SOX6-213ENST00000530378 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 CNN1P51911 297 aaKnown RBP7.89□□□□□ -1.15
SOX6-213ENST00000530378 FXYD7P58549 80 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 UBE2G1P62253 170 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 OR10J6PQ8NGY7 276 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms