RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 PHF3Q92576 2039 aaKnown RBP6.52□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE12JA6NER3 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE1Q13065 139 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE4Q13068 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE5Q13069 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF726P1Q15940 193 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 FAM120AOSQ5T036 256 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 GFRA4Q9GZZ7 299 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 CEP290O15078 2479 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 INS-IGF2F8WCM5 200 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 IGKV1-39P01597 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 IGKV1D-39P04432 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 C2orf82Q6UX34 121 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 SSC4DQ8WTU2 575 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 LINC01619G3V211 115 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 LEPROTO15243 131 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 DTX1Q86Y01 620 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 Q8TCH9 128 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 SRSF8Q9BRL6 282 aaKnown RBP6.51□□□□□ -1.37
CTNND1-220ENST00000529526 TP53TG1Q9Y2A0 90 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 LRRK1Q38SD2 2015 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 IGHV2-70DA0A0C4DH43 119 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 ITGB1BP1O14713 200 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 LMO1P25800 156 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 TMEM190Q8WZ59 177 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 MMP23AO75900 390 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 PRIMA1Q86XR5 153 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 EDA2RQ9HAV5 297 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 LOXP28300 417 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-220ENST00000529526 TEX36Q5VZQ5 186 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 TRPT1Q86TN4 253 aaKnown RBP6.51□□□□□ -1.37
CTNND1-220ENST00000529526 HAPLN4Q86UW8 402 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 C1QTNF4Q9BXJ3 329 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 TSC2P49815 1807 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 IGHV3-38A0A0C4DH36 116 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 SS18Q15532 418 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 NEGR1Q7Z3B1 354 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 C1orf147Q96MC9 270 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-220ENST00000529526 MGAMO43451 1857 aa6.51□□□□□ -1.37
CTNND1-220ENST00000529526 MYMXA0A1B0GTQ4 84 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 PFN1P07737 140 aaKnown RBP6.5□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF134P52741 427 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 PDE6HQ13956 83 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 OCIAD2Q56VL3 154 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 CACNA1EQ15878 2313 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 WDR81Q562E7 1941 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 TRBV19A0A075B6N1 114 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 C8orf86Q6ZUL3 223 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 IGFBPL1Q8WX77 278 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 CFPP27918 469 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 PRSS57Q6UWY2 283 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 LY6G5BQ8NDX9 201 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-220ENST00000529526 YLPM1P49750 1951 aaKnown RBP6.5□□□□□ -1.37
CTNND1-220ENST00000529526 NDUFS6O75380 124 aaKnown RBP6.5□□□□□ -1.37
CTNND1-220ENST00000529526 GATA4P43694 442 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 C3orf56Q8N813 242 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 DLX4Q92988 240 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-220ENST00000529526 DLEU1O43261 78 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 LGALS1P09382 135 aaKnown RBP6.5□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 RNF114Q9Y508 228 aa6.5□□□□□ -1.37
CTNND1-220ENST00000529526 RTTNQ86VV8 2226 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 PRSS46E5RG02 174 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF48Q96MX3 618 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-220ENST00000529526 F5H768 121 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 C15orf65H3BRN8 121 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 YPEL3P61236 119 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-220ENST00000529526 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF492Q9P255 531 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ZDBF2Q9HCK1 2354 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 IGLV3-9A0A075B6K5 115 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ETV2O00321 342 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-220ENST00000529526 AZU1P20160 251 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 WT1-ASQ06250 92 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 HELZP42694 1942 aaKnown RBP6.49□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 EREGO14944 169 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE7O76087 117 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF124Q15973 351 aa6.49□□□□□ -1.37
CTNND1-220ENST00000529526 RSPO1Q2MKA7 263 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-220ENST00000529526 H3BRN7 92 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 MRPL51Q4U2R6 128 aaKnown RBP6.48□□□□□ -1.37
CTNND1-220ENST00000529526 ZFAND6Q6FIF0 208 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF114Q8NC26 417 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 FANCMQ8IYD8 2048 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 VWC2LB2RUY7 222 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE2BQ13066 116 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 SLAQ13239 276 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 FAM104BQ5XKR9 115 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 C9JAW5 83 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 CEACAM8P31997 349 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms