RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 ARV1Q9H2C2 271 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 A0A087WTM6 91 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 PAX4O43316 350 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 PRB4P10163 310 aaPredicted RBP9.23□□□□□ -0.93
HIF3A-212ENST00000529205 KRTAP10-1P60331 282 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 KIR3DS1Q14943 382 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 Q6ZSN1 163 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 BPIFA4PQ86YQ2 179 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 ZNF680Q8NEM1 530 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
HIF3A-212ENST00000529205 NPVFQ9HCQ7 196 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
HIF3A-212ENST00000529205 K7EP13 123 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 PLA2G10O15496 165 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 SLAQ13239 276 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 LINC00299Q6ZSB3 139 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 ZBTB8BQ8NAP8 495 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-212ENST00000529205 PSENENQ9NZ42 101 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 FUT9Q9Y231 359 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 TNFRSF18Q9Y5U5 241 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 PXMP4Q9Y6I8 212 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 LY96Q9Y6Y9 160 aa9.22□□□□□ -0.93
HIF3A-212ENST00000529205 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.93
HIF3A-212ENST00000529205 TRGV1A0A0A0MS02 117 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 GOSR2O14653 212 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 ZNF324O75467 553 aaPredicted RBP9.21□□□□□ -0.94
HIF3A-212ENST00000529205 HOXB5P09067 269 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 DNAH10OSP0CZ25 163 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 IL7P13232 177 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 BTCP35070 178 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 SPANXN2Q5MJ10 180 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 TEPPQ6URK8 271 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 LINC00305Q7Z4B0 112 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 ODF3Q96PU9 254 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 MGAT4CQ9UBM8 478 aa9.21□□□□□ -0.94
HIF3A-212ENST00000529205 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
HIF3A-212ENST00000529205 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
HIF3A-212ENST00000529205 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
HIF3A-212ENST00000529205 EVI2AP22794 236 aa9.2□□□□□ -0.94
HIF3A-212ENST00000529205 AP3S2P59780 193 aa9.2□□□□□ -0.94
HIF3A-212ENST00000529205 RRAS2P62070 204 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-212ENST00000529205 MRPL23Q16540 153 aaKnown RBP9.2□□□□□ -0.94
HIF3A-212ENST00000529205 OR10P1Q8NGE3 313 aa9.2□□□□□ -0.94
HIF3A-212ENST00000529205 ZNF431Q8TF32 576 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-212ENST00000529205 GSN-AS1Q9NRJ2 163 aa9.2□□□□□ -0.94
HIF3A-212ENST00000529205 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
HIF3A-212ENST00000529205 PRAC2D3DTV9 90 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 FNDC10F2Z333 226 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 K7EPK0 472 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 COX7A2P2O60397 106 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 SFT2D2O95562 160 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
HIF3A-212ENST00000529205 GUK1Q16774 197 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 C4orf46Q504U0 113 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 PATE2Q6UY27 113 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 NEGR1Q7Z3B1 354 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 ZNF546Q86UE3 836 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 EIF4E3Q8N5X7 224 aaKnown RBP9.19□□□□□ -0.94
HIF3A-212ENST00000529205 SLC25A21Q9BQT8 299 aaPredicted RBP9.19□□□□□ -0.94
HIF3A-212ENST00000529205 MSRB1Q9NZV6 116 aa9.19□□□□□ -0.94
HIF3A-212ENST00000529205 LINC00854A0A1B0GVQ3 168 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 CT45A10P0DMU9 189 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 POLR2GP62487 172 aaKnown RBP eCLIP9.18□□□□□ -0.94
HIF3A-212ENST00000529205 ID3Q02535 119 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 ANXA2RQ3ZCQ2 193 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 ST6GAL2Q96JF0 529 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 LINC00467Q9BRT7 94 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 TMEM70Q9BUB7 260 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 HHLA3Q9XRX5 114 aa9.18□□□□□ -0.94
HIF3A-212ENST00000529205 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 C7orf71A4D174 169 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 PSCAO43653 123 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 SLC38A11Q08AI6 406 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 C10orf113Q5VZT2 155 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 TOMM5Q8N4H5 51 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 SMIM8Q96KF7 97 aa9.17□□□□□ -0.94
HIF3A-212ENST00000529205 H3BTX0 84 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 SLC17A3O00476 420 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 SSSCA1O60232 199 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 SPINK4O60575 86 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 MPDU1O75352 247 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 METTL15P1P0C7V9 234 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 CRYBA4P53673 196 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 PPP1R1AQ13522 171 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 ZNF846Q147U1 533 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
HIF3A-212ENST00000529205 Q6ZRG5 221 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 C11orf72Q8NBR9 251 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
HIF3A-212ENST00000529205 PCNPQ8WW12 178 aaKnown RBP9.16□□□□□ -0.94
HIF3A-212ENST00000529205 S100ZQ8WXG8 99 aa9.16□□□□□ -0.94
HIF3A-212ENST00000529205 RGS13O14921 159 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 AGPAT2O15120 278 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 PRAF2O60831 178 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 UPK1BO75841 260 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms