RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 H3BQ15 152 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 NMBP08949 121 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 HLA-DRB4P13762 266 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 ICAM4Q14773 271 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 SAPCD1Q5SSQ6 148 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 MORN5Q5VZ52 161 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 CST9LP1Q5W188 147 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 ATG101Q9BSB4 218 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 VAX2Q9UIW0 290 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 HLA-DRB4X5D2U9 266 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 VWFP04275 2813 aa5.92□□□□□ -1.46
SSBP3-211ENST00000528787 EDN2P20800 178 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 LEPP41159 167 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 CNN1P51911 297 aaKnown RBP5.91□□□□□ -1.46
SSBP3-211ENST00000528787 FGF8P55075 233 aaPredicted RBP5.91□□□□□ -1.46
SSBP3-211ENST00000528787 UBE2G1P62253 170 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 PEA15Q15121 130 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 ZNF726P1Q15940 193 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 ODF3L2Q3SX64 289 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 CYB561D1Q8N8Q1 229 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 OR8A1Q8NGG7 326 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 LYPD6BQ8NI32 183 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 C20orf144Q9BQM9 153 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 SRD5A3Q9H8P0 318 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 BIN3Q9NQY0 253 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 GNG13Q9P2W3 67 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 BOLA1Q9Y3E2 137 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 TRRAPQ9Y4A5 3859 aa5.91□□□□□ -1.46
SSBP3-211ENST00000528787 MGAM2Q2M2H8 2515 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 A0A0J9YX75 114 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 FAM74A7A6NL05 159 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 C11orf94C9JXX5 98 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 NDUFB4O95168 129 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 CD7P09564 240 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 BCL2P10415 239 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 SUMO1P63165 101 aaKnown RBP5.9□□□□□ -1.46
SSBP3-211ENST00000528787 MEF2BQ02080 365 aaPredicted RBP5.9□□□□□ -1.46
SSBP3-211ENST00000528787 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 C9orf47Q6ZRZ4 202 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 TMEM256Q8N2U0 113 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 TMEM75Q8N9X5 138 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 OR4B1Q8NGF8 309 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 SMIM12Q96EX1 92 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 ZNF503Q96F45 646 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 FMC1Q96HJ9 113 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 PRR25Q96S07 402 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 EIF5A2Q9GZV4 153 aaKnown RBP5.9□□□□□ -1.46
SSBP3-211ENST00000528787 CSTL1Q9H114 145 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 AURKAIP1Q9NWT8 199 aaPredicted RBP5.9□□□□□ -1.46
SSBP3-211ENST00000528787 EPDR1Q9UM22 224 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 ZFP30Q9Y2G7 519 aa5.9□□□□□ -1.46
SSBP3-211ENST00000528787 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 RBFOX3A6NFN3 312 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 DIRC3C9JPN6 131 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 TMEM250H0YL14 139 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 H3BMM0 161 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 SLC17A3O00476 420 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 PAGE4O60829 102 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 TCRAP04437 139 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 NHLRC4P0CG21 123 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-211ENST00000528787 IGHV4-30-4P0DP06 118 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 CDKN1BP46527 198 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 UBE2G2P60604 165 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 HIST1H1AQ02539 215 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-211ENST00000528787 DEFB121Q5J5C9 76 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 CLLU1Q5K131 121 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 Q6ZWC4 215 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 Q8N1Y9 231 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 EXOC3-AS1Q8N2X6 119 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 MRAPQ8TCY5 172 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 ZMAT4Q9H898 229 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 TP53TG1Q9Y2A0 90 aa5.89□□□□□ -1.47
SSBP3-211ENST00000528787 TRBV6-1A0A0K0K1D8 114 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 NPIPB6E9PJ23 425 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 PEX7O00628 323 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 RGS13O14921 159 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 INSP01308 110 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 CT45A10P0DMU9 189 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 AKR1C3P42330 323 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 ZNF138P52744 262 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 TAS2R60P59551 318 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 FAM74A3Q4VXF1 159 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
SSBP3-211ENST00000528787 DEFB125Q8N687 156 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 RNF182Q8N6D2 247 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 C17orf77Q96MU5 243 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 GOLT1BQ9Y3E0 138 aa5.88□□□□□ -1.47
SSBP3-211ENST00000528787 A0A1B0GV50 99 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 RAB19A4D1S5 217 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 SMIM9A6NGZ8 99 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 A8MTW9 85 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 GGTLC3B5MD39 225 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 H3BTX0 84 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 GPX1P07203 203 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 FLI1Q01543 452 aaPredicted RBP5.87□□□□□ -1.47
SSBP3-211ENST00000528787 ZNF506Q5JVG8 444 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms