RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 LOC105371267A0A1B0GV96 52 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 COLCA2A8K830 154 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 M0R036 132 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 CD81P60033 236 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 LCN12Q6JVE5 192 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 BLNKQ8WV28 456 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TRBV19A0A075B6N1 114 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 K7EQG2 157 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 SLC17A3O00476 420 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 SOCS3O14543 225 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 NDUFB4O95168 129 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 IQCF2Q8IXL9 164 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 SPAG8Q99932 426 aaPredicted RBP9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TMEM242Q9NWH2 141 aa9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 ZNF256Q9Y2P7 627 aaPredicted RBP9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TRAV8-2A0A0B4J237 113 aa9.09□□□□□ -0.95
TRAF3IP2-211ENST00000528599 CXorf65A6NEN9 183 aa9.09□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PAFAH1B2P68402 229 aa9.09□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RNF212Q495C1 297 aa9.09□□□□□ -0.95
TRAF3IP2-211ENST00000528599 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TRAV2A0A0B4J234 112 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 MEOX2P50222 304 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 BEAN1Q3B7T3 259 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SDF2L1Q9HCN8 221 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ZNF331Q9NQX6 463 aaPredicted RBP9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 TMEM167BQ9NRX6 74 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PRELID1Q9Y255 219 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
TRAF3IP2-211ENST00000528599 OR4C46A6NHA9 309 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PDE6DO43924 150 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PAGE4O60829 102 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 HLA-DMBP28068 263 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 EGFEM1PQ0D2K5 195 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 C16orf92Q96LL3 132 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ISLRO14498 428 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ZNF253O75346 499 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ZNF688P0C7X2 276 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 RANP62826 216 aaKnown RBP9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PDE6HQ13956 83 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 EXOC3-AS1Q8N2X6 119 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 RNF182Q8N6D2 247 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 C20orf173Q96LM9 149 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ZNF727A8MUV8 499 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 F6UZH7 168 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 CD7P09564 240 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 UBE2G2P60604 165 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 TMEM241Q24JQ0 296 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 YPEL4Q96NS1 127 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 YTHDF2Q9Y5A9 579 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SORL1Q92673 2214 aa9.06□□□□□ -0.96
TRAF3IP2-211ENST00000528599 C11orf94C9JXX5 98 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PRB4P10163 310 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ID1P41134 155 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 CEBPGP53567 150 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 FLI1Q01543 452 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ODF3L2Q3SX64 289 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 CTDSP1Q9GZU7 261 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 Q9H3A6 140 aa9.05□□□□□ -0.96
TRAF3IP2-211ENST00000528599 M0R3E3 92 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 AKR1C3P42330 323 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 DEFB131AP59861 70 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 DEFB1P60022 68 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PSG9Q00887 426 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 LYPD1Q8N2G4 141 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 HIST1H2BAQ96A08 127 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PRR25Q96S07 402 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 C19orf73Q9NVV2 129 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 A0A1W2PRE2 83 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PGPA6NDG6 321 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 GGTLC3B5MD39 225 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PRB2P02812 416 aaPredicted RBP9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 ZNF124Q15973 351 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PSG3Q16557 428 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 KPRPQ5T749 579 aaPredicted RBP9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SMIM7Q9BQ49 75 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 PARLQ9H300 379 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 OTORQ9NRC9 128 aa9.04□□□□□ -0.96
TRAF3IP2-211ENST00000528599 SUMO1P63165 101 aaKnown RBP9.03□□□□□ -0.96
TRAF3IP2-211ENST00000528599 DEFA6Q01524 100 aa9.03□□□□□ -0.96
TRAF3IP2-211ENST00000528599 APRG1Q8IVJ8 170 aa9.03□□□□□ -0.96
TRAF3IP2-211ENST00000528599 Q8N1Y9 231 aa9.03□□□□□ -0.96
TRAF3IP2-211ENST00000528599 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
TRAF3IP2-211ENST00000528599 AAMDCQ9H7C9 122 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms